title: Development and optimization of a gas chromatography/mass spectrometry method for the analysis of thermochemolytic degradation products of phthiocerol dimycocerosate waxes found in Mycobacterium tuberculosis.
abstract: BACKGROUND
  The phthiocerol dimycocerosates (PDIMs) are certain stable and hydrophobic waxes found in the cell membrane of Mycobacterium tuberculosis, bacteria that cause an infectious disease of growing concern worldwide. Previous studies report the analysis of derivatives of the hydrolysed PDIMs from biological samples, following complex extraction and offline derivatization of PDIMs biomarkers, prior to their analysis by gas chromatography/mass spectrometry (GC/MS).
  
  
  METHODS
  We developed and optimized a GC/MS method based on selected ion monitoring (SIM) to detect the derivatives produced via the thermally assisted hydrolysis and methylation (THM) of the PDIMs from the cell membrane of M. tuberculosis. The extraction of PDIMs from culture is simple, and their thermochemolysis is carried out automatically online, thus avoiding the time-consuming derivatization steps of hydrolysis and esterification, usually performed offline.
  
  
  RESULTS
  For standard PDIMs in petroleum ether, our optimized method gave an excellent linearity (R(2) = 0.99) at concentrations between 0.172 and 27.5 ng/mL, a good precision (RSD = 11.42%), and a limit of detection (LOD) of 100 pg/mL. For the PDIMs extracted from dilutions of M. tuberculosis culture, the method gave good linearity (R(2) = 0.9685) and an estimated LOD of 400 CFU/mL (CFU = colony forming units) in sterile distilled water.
  
  
  CONCLUSIONS
  A GC/MS(SIM) method is presented for the rapid and quantitative detection of M. tuberculosis, based on the online thermochemolysis of lipidic biomarkers extracted from the bacterial culture. The method has the potential to be applied in human and veterinary clinical laboratories for the rapid diagnosis of tuberculosis in infected biological samples.
authors.affiliation: Department of Physical Sciences, Faculty of Science, The Open University, Walton Hall, Milton Keynes, MK7 6AA, UK.
authors.forename: Simona C
authors.initials: SC
authors.lastname: Nicoara
authors.forename: David E
authors.initials: DE
authors.lastname: Minnikin
authors.forename: Oona C Y
authors.initials: OC
authors.lastname: Lee
authors.forename: Denise M
authors.initials: DM
authors.lastname: O'Sullivan
authors.forename: Ruth
authors.initials: R
authors.lastname: McNerney
authors.forename: Collin T
authors.initials: CT
authors.lastname: Pillinger
authors.forename: Ian P
authors.initials: IP
authors.lastname: Wright
authors.forename: Geraint H
authors.initials: GH
authors.lastname: Morgan
mesh_terms: D000942:Antigens, Bacterial / Q000032:analysis*; D008401:Gas Chromatography-Mass Spectrometry / Q000191:economics / Q000379:methods*; D006801:Humans; D006868:Hydrolysis; D057230:Limit of Detection; D008055:Lipids / Q000032:analysis*; D009169:Mycobacterium tuberculosis / Q000302:isolation & purification*; D014376:Tuberculosis / Q000175:diagnosis / Q000382:microbiology
chemical_list: D000942:Antigens, Bacterial; D008055:Lipids; C008901:phthiocerol dimycocerosate