title: Influence of the Changjiang River flood on Synechococcus ecology in the surface waters of the East China Sea.
abstract: Synechococcus spp. have been suggested as the primary component of picophytoplankton in the East China Sea (ECS). However, the influences of sudden environmental changes on Synechococcus assemblage composition have not yet been investigated. In the summer of 2010, a disastrous flood occurred in the Changjiang River basin. To improve our understanding of how this flood affected the Synechococcus ecology on the ECS surface, their assemblages and distributions have been described using two-laser flow cytometry and phylogenetic analysis of the phycocyanin operon. During the nonflooding summer of 2009, phycoerythrin-rich (PE-rich) Synechococcus thrived near the outer boundary of the Changjiang River diluted water (CDW) coverage, while phycocyanin-rich (PC-rich) Synechococcus predominated inside the turbid CDW with a transparency of <80%. During the 2010 summer, flooding expanded the CDW coverage area to over half of the ECS. PE-rich cells showed a homogeneous distribution and a decline in abundance, while the spatial pattern of the PC-rich Synechococcus resembled the pattern from 2009. Based on the phycocyanin operon phylogeny, the Synechococcus in the ECS were categorized into five groups, ECS-1 to ECS-4 and ECS-PE, comprising a total of 19 operational taxonomic units. In the summer of 2009, ECS-2 dominated in the coast, and the ECS-3 and ECS-PE clades prevailed in the offshore waters. However, during the summer of 2010, ECS-4 and ECS-PE became the dominant strains. The injection of abundant anthropogenic pollutants and the enhancement of transparency within the CDW expansion area appear to be the factors needed to transiently alter the ecology of Synechococcus after flooding.
authors.affiliation: Institute of Marine Environmental Chemistry and Ecology, National Taiwan Ocean University, Keelung, 20224, Taiwan, Republic of China, chungcc@mail.ntou.edu.tw.
authors.forename: Chih-Ching
authors.initials: CC
authors.lastname: Chung
authors.forename: Chin-Yi
authors.initials: CY
authors.lastname: Huang
authors.forename: Gwo-Ching
authors.initials: GC
authors.lastname: Gong
authors.forename: Yun-Chi
authors.initials: YC
authors.lastname: Lin
mesh_terms: D044822:Biodiversity; D002681:China; D004269:DNA, Bacterial / Q000235:genetics; D004463:Ecology; D055868:Floods; D009792:Oceans and Seas; D010798:Phycocyanin / Q000737:chemistry; D010799:Phycoerythrin / Q000737:chemistry; D010802:Phylogeny; D058974:Phylogeography; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D045483:Rivers / Q000382:microbiology*; D012621:Seasons; D017422:Sequence Analysis, DNA; D046940:Synechococcus / Q000145:classification* / Q000302:isolation & purification*; D014867:Water / Q000737:chemistry; D014871:Water Microbiology
chemical_list: D004269:DNA, Bacterial; D012336:RNA, Ribosomal, 16S; D014867:Water; D010798:Phycocyanin; D010799:Phycoerythrin