title: Recently deglaciated high-altitude soils of the Himalaya: diverse environments, heterogenous bacterial communities and long-range dust inputs from the upper troposphere.
abstract: BACKGROUND
  The Himalaya with its altitude and geographical position forms a barrier to atmospheric transport, which produces much aqueous-particle monsoon precipitation and makes it the largest continuous ice-covered area outside polar regions. There is a paucity of data on high-altitude microbial communities, their native environments and responses to environmental-spatial variables relative to seasonal and deglaciation events.
  
  
  RESULTS
  Soils were sampled along altitude transects from 5000 m to 6000 m to determine environmental, spatial and seasonal factors structuring bacterial communities characterized by 16 S rRNA gene deep sequencing. Dust traps and fresh-snow samples were used to assess dust abundance and viability, community structure and abundance of dust associated microbial communities. Significantly different habitats among the altitude-transect samples corresponded to both phylogenetically distant and closely-related communities at distances as short as 50 m showing high community spatial divergence. High within-group variability that was related to an order of magnitude higher dust deposition obscured seasonal and temporal rearrangements in microbial communities. Although dust particle and associated cell deposition rates were highly correlated, seasonal dust communities of bacteria were distinct and differed significantly from recipient soil communities. Analysis of closest relatives to dust OTUs, HYSPLIT back-calculation of airmass trajectories and small dust particle size (4-12 µm) suggested that the deposited dust and microbes came from distant continental, lacustrine and marine sources, e.g. Sahara, India, Caspian Sea and Tibetan plateau. Cyanobacteria represented less than 0.5% of microbial communities suggesting that the microbial communities benefitted from (co)deposited carbon which was reflected in the psychrotolerant nature of dust-particle associated bacteria.
  
  
  CONCLUSIONS
  The spatial, environmental and temporal complexity of the high-altitude soils of the Himalaya generates ongoing disturbance and colonization events that subject heterogeneous microniches to stochastic colonization by far away dust associated microbes and result in the observed spatially divergent bacterial communities.
authors.affiliation: Department of Animal Science, University of Ljubljana, Domzale, Slovenia.
authors.forename: Blaz
authors.initials: B
authors.lastname: Stres
authors.forename: Woo Jun
authors.initials: WJ
authors.lastname: Sul
authors.forename: Bostjan
authors.initials: B
authors.lastname: Murovec
authors.forename: James M
authors.initials: JM
authors.lastname: Tiedje
mesh_terms: D000531:Altitude; D000704:Analysis of Variance; D001272:Atmosphere / Q000737:chemistry*; D001483:Base Sequence; D004391:Dust / Q000032:analysis; D004777:Environment; D059014:High-Throughput Nucleotide Sequencing; D064307:Microbiota / Q000235:genetics*; D008969:Molecular Sequence Data; D009390:Nepal; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012621:Seasons; D017422:Sequence Analysis, DNA; D012987:Soil / Q000737:chemistry*; D012988:Soil Microbiology
chemical_list: D004391:Dust; D012336:RNA, Ribosomal, 16S; D012987:Soil