title: Strategy using three layers of surface charge for computing solvation free energy of ions.
abstract: Continuum solvent model is the common used strategy for computing the solvation free energy. However, the dielectric polarization from Gauss's law differs from that obtained from molecular dynamics simulations. To mimic the dielectric polarization surrounding a solute in molecular dynamics simulations, the first-shell water molecule was modeled using a charge distribution of TIP4P molecule in a hard sphere. The dielectric polarization of the first-shell water was modeled as a pair of surface charge layers with a fixed distance between them, but with variable, equal, and opposite charge magnitudes that respond to the electric field on the first-shell water. The water outside the first shell water is treated as a bulk solvent, and the electric effect of the bulk solvent can be modeled as a surface charge. Based on this strategy, the analytical solution describing the solvation free energy of ions was derived, and the values of computed solvation free energy were compared to the values of experiments.
authors.affiliation: Department of Biomedical Engineering, I-SHOU University, Kaohsiung 840, Taiwan, ROC. Electronic address: peikun@isu.edu.tw.
authors.forename: Pei-Kun
authors.initials: PK
authors.lastname: Yang
mesh_terms: D007477:Ions / Q000737:chemistry; D056004:Molecular Dynamics Simulation; D012995:Solubility; D012997:Solvents / Q000737:chemistry*; D055672:Static Electricity; D013499:Surface Properties; D013816:Thermodynamics; D014867:Water / Q000737:chemistry
chemical_list: D007477:Ions; D012997:Solvents; D014867:Water
keywords: Born equation; Continuum solvent model; Excluded solvent volume; Surface water; TIP4P