title: On the optical absorption of the anionic GFP chromophore in vacuum, solution, and protein.
abstract: In spite of the large number of experimental and theoretical studies, the optical absorption trend of the green fluorescent protein (GFP) chromophore in several environments has not been fully understood. We calculated at the same level of time dependent density functional theory the vertical excitation energy of the anionic GFP chromophore in the protein and in ethanol, dioxane, methanol and water solutions. As result, we reproduced for the first time the experimental trend of the absorption peaks with 0.015 eV as the standard deviation of the accuracy. This systematic error allowed us to analyze with confidence the relative weight of several solvation effects on the vertical excitation energy. Experimental trends not correlated with the solvent polarity were therefore explained with a fine balance of different steric and electronic effects on the photophysics of the chromophore. As an indirect and remarkable result, the present analysis confirms that the optical absorption of the chromophore in the gas phase is close to the value of 2.84 eV extrapolated by Dong et al. (J. Am. Chem. Soc., 2006, 128, 12038), and, as a consequence, that the protein environment induces a red shift of 0.23 eV.
authors.affiliation: Dipartimento di Scienze Chimiche, Università di Napoli 'Federico II', Complesso Universitario di M. S. Angelo, via Cintia, I-80126 Napoli, Italy. nadia.rega@unina.it.
authors.forename: Alessio
authors.initials: A
authors.lastname: Petrone
authors.forename: Pasquale
authors.initials: P
authors.lastname: Caruso
authors.forename: Silvia
authors.initials: S
authors.lastname: Tenuta
authors.forename: Nadia
authors.initials: N
authors.lastname: Rega
mesh_terms: D000838:Anions / Q000737:chemistry; D005740:Gases / Q000737:chemistry; D049452:Green Fluorescent Proteins / Q000737:chemistry*; D048288:Imidazolines / Q000737:chemistry*; D011506:Proteins / Q000737:chemistry* / Q000378:metabolism; D011789:Quantum Theory; D012996:Solutions / Q000737:chemistry*; D013816:Thermodynamics; D014618:Vacuum
chemical_list: D000838:Anions; D005740:Gases; D048288:Imidazolines; D011506:Proteins; D012996:Solutions; D049452:Green Fluorescent Proteins