title: Spatial wavelet analysis of calcium oscillations in developing neurons.
abstract: Calcium signals play a major role in the control of all key stages of neuronal development, and in particular in the growth and orientation of neuritic processes. These signals are characterized by high spatial compartmentalization, a property which has a strong relevance in the different roles of specific neuronal regions in information coding. In this context it is therefore important to understand the structural and functional basis of this spatial compartmentalization, and in particular whether the behavior at each compartment is merely a consequence of its specific geometry or the result of the spatial segregation of specific calcium influx/efflux mechanisms. Here we have developed a novel approach to separate geometrical from functional differences, regardless on the assumptions on the actual mechanisms involved in the generation of calcium signals. First, spatial indices are derived with a wavelet-theoretic approach which define a measure of the oscillations of cytosolic calcium concentration in specific regions of interests (ROIs) along a cell, in our case developing chick ciliary ganglion neurons. The resulting spatial profile demonstrates clearly that different ROIs along the neuron are characterized by specific patterns of calcium oscillations. Next we have investigated whether this inhomogeneity is due just to geometrical factors, namely the surface to volume ratio in the different subcompartments (e.g. soma vs. growth cone) or it depends on their specific biophysical properties. To this aim correlation functions are computed between the activity indices and the surface/volume ratio along the cell: the data thus obtained are validated by a statistical analysis on a dataset of [Formula: see text] different cells. This analysis shows that whereas in the soma calcium dynamics is highly correlated to the surface/volume ratio, correlations drop in the growth cone-neurite region, suggesting that in this latter case the key factor is the expression of specific mechanisms controlling calcium influx/efflux.
authors.affiliation: Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy ; NIS Interdepartmental Center, University of Turin, Turin, Italy.
authors.forename: Federico Alessandro
authors.initials: FA
authors.lastname: Ruffinatti
authors.forename: Alessandra
authors.initials: A
authors.lastname: Gilardino
authors.forename: Davide
authors.initials: D
authors.lastname: Lovisolo
authors.forename: Mario
authors.initials: M
authors.lastname: Ferraro
mesh_terms: D000818:Animals; D020013:Calcium Signaling; D002645:Chickens; D009474:Neurons / Q000166:cytology / Q000378:metabolism*; D013997:Time Factors; D058067:Wavelet Analysis