title: Strategies for biochemical and pathologic quality assurance in a large multi-institutional biorepository; The experience of the PROCURE Quebec Prostate Cancer Biobank.
abstract: Well-characterized, high-quality fresh-frozen prostate tissue is required for prostate cancer research. As part of the PROCURE Prostate Cancer Biobank launched in 2007, four University Hospitals in Quebec joined to bank fresh frozen prostate tissues from radical prostatectomies (RP). As the biobank progressed towards allocation, the nature and quality of the tissues were determined. RP tissues were collected by standardized alternate mirror-image or biopsy-based targeted methods, and frozen for banking. Clinical/pathological parameters were captured. For quality control, two presumed benign and two presumed cancerous frozen, biobanked tissue blocks per case (10/site) were randomly selected during the five years of collection. In a consensus meeting, 4 pathologists blindly evaluated slides (n=160) and graded quality, Gleason score (GS), and size of cancer foci. The quality of tissue RNA (37/40 cases) was assessed using the RNA Integrity Number. The biobank included 1819 patients of mean age: 62.1 years; serum PSA: 8 ng/ml; prostate weight: 47.8 g; GS: 7; and pathological stage: T2 in 64.5%, T3A in 25.5% and T3B in 10% of cases. Of the 157 evaluable slides, 79 and 78 had benign and cancer tissue, respectively. GS for the 37 cancer-positive cases were: 6 in 9, 7 in 18 and >7 in 10 and, in most instances, in concordance with final GS. In 40% of slides containing cancer, foci occupied ≥50% of block surface and 42% had a diameter ≥1 cm. Tissue was well preserved and consistently yielded RNA of very good quality with RNA Integrity Number (RIN) >7 for 97% of cases (mean=8.7 ± 0.7) during the five-year collection period. This study confirms the high quality of randomly selected benign and cancerous fresh-frozen prostate tissues of the PROCURE Quebec Prostate Cancer Biobank. These results strengthen the uniqueness of this large prospective resource for prostate cancer research.
authors.forename: Fadi
authors.initials: F
authors.lastname: Brimo
authors.forename: Armen
authors.initials: A
authors.lastname: Aprikian
authors.forename: Mathieu
authors.initials: M
authors.lastname: Latour
authors.forename: Bernard
authors.initials: B
authors.lastname: Têtu
authors.forename: Alexandre
authors.initials: A
authors.lastname: Doueik
authors.forename: Eleonora
authors.initials: E
authors.lastname: Scarlata
authors.forename: Lucie
authors.initials: L
authors.lastname: Hamel
authors.forename: Ginette
authors.initials: G
authors.lastname: McKercher
authors.forename: Fred
authors.initials: F
authors.lastname: Saad
authors.forename: Louis
authors.initials: L
authors.lastname: Lacombe
authors.forename: Michel
authors.initials: M
authors.lastname: Carmel
authors.forename: Simone
authors.initials: S
authors.lastname: Chevalier
mesh_terms: D004247:DNA / Q000032:analysis; D006801:Humans; D008297:Male; D008875:Middle Aged; D011467:Prostate / Q000378:metabolism / Q000473:pathology*; D011471:Prostatic Neoplasms / Q000097:blood / Q000473:pathology / Q000601:surgery* / Q000652:urine; D011786:Quality Control; D011792:Quebec; D012313:RNA / Q000032:analysis; D013048:Specimen Handling / Q000379:methods*; D014015:Tissue Banks / Q000458:organization & administration
chemical_list: D012313:RNA; D004247:DNA