title: Spectral tuning of ultraviolet cone pigments: an interhelical lock mechanism.
abstract: Ultraviolet (UV) cone pigments can provide insights into the molecular evolution of vertebrate vision since they are nearer to ancestral pigments than the dim-light rod photoreceptor rhodopsin. While visible-absorbing pigments contain an 11-cis retinyl chromophore with a protonated Schiff-base (PSB11), UV pigments uniquely contain an unprotonated Schiff-base (USB11). Upon F86Y mutation in model UV pigments, both the USB11 and PSB11 forms of the chromophore are found to coexist at physiological pH. The origin of this intriguing equilibrium remains to be understood at the molecular level. Here, we address this phenomenon and the role of the USB11 environment in spectral tuning by combining mutagenesis studies with spectroscopic (UV-vis) and theoretical [DFT-QM/MM (SORCI+Q//B3LYP/6-31G(d): Amber96)] analysis. We compare structural models of the wild-type (WT), F86Y, S90A and S90C mutants of Siberian hamster ultraviolet (SHUV) cone pigment to explore structural rearrangements that stabilize USB11 over PSB11. We find that the PSB11 forms upon F86Y mutation and is stabilized by an "inter-helical lock" (IHL) established by hydrogen-bonding networks between transmembrane (TM) helices TM6, TM2, and TM3 (including water w2c and amino acid residues Y265, F86Y, G117, S118, A114, and E113). The findings implicate the involvement of the IHL in constraining the displacement of TM6, an essential component of the activation of rhodopsin, in the spectral tuning of UV pigments.
authors.affiliation: Department of Chemistry, Yale University , New Haven, Connecticut 06520-8107 United States.
authors.forename: Sivakumar
authors.initials: S
authors.lastname: Sekharan
authors.forename: Victoria L
authors.initials: VL
authors.lastname: Mooney
authors.forename: Ivan
authors.initials: I
authors.lastname: Rivalta
authors.forename: Manija A
authors.initials: MA
authors.lastname: Kazmi
authors.forename: Maureen
authors.initials: M
authors.lastname: Neitz
authors.forename: Jay
authors.initials: J
authors.lastname: Neitz
authors.forename: Thomas P
authors.initials: TP
authors.lastname: Sakmar
authors.forename: Elsa C Y
authors.initials: EC
authors.lastname: Yan
authors.forename: Victor S
authors.initials: VS
authors.lastname: Batista
mesh_terms: D000818:Animals; D006224:Cricetinae; D018360:Crystallography, X-Ray; D019143:Evolution, Molecular; D008958:Models, Molecular; D011789:Quantum Theory; D012168:Retinal Pigments / Q000737:chemistry*; D017299:Rod Opsins / Q000737:chemistry*; D012545:Schiff Bases / Q000737:chemistry; D014466:Ultraviolet Rays
chemical_list: D012168:Retinal Pigments; D017299:Rod Opsins; D012545:Schiff Bases; C095853:short-wavelength opsin