title: A new automatic image analysis method for assessing estrogen receptors' status in breast tissue specimens.
abstract: Manual assessment of estrogen receptors' (ER) status from breast tissue microscopy images is a subjective, time consuming and error prone process. Automatic image analysis methods offer the possibility to obtain consistent, objective and rapid diagnoses of histopathology specimens. In breast cancer biopsies immunohistochemically (IHC) stained for ER, cancer cell nuclei present a large variety in their characteristics that bring various difficulties for traditional image analysis methods. In this paper, we propose a new automatic method to perform both segmentation and classification of breast cell nuclei in order to give quantitative assessment and uniform indicators of IHC staining that will help pathologists in their diagnostic. Firstly, a color geometric active contour model incorporating a spatial fuzzy clustering algorithm is proposed to detect the contours of all cell nuclei in the image. Secondly, overlapping and touching nuclei are separated using an improved watershed algorithm based on a concave vertex graph. Finally, to identify positive and negative stained nuclei, all the segmented nuclei are classified into five categories according to their staining intensity and morphological features using a trained multilayer neural network combined with Fisher's linear discriminant preprocessing. The proposed method is tested on a large dataset containing several breast tissue images with different levels of malignancy. The experimental results show high agreement between the results of the method and ground-truth from the pathologist panel. Furthermore, a comparative study versus existing techniques is presented in order to demonstrate the efficiency and the superiority of the proposed method.
authors.affiliation: ESSTT-SICISI Laboratory, University of Tunis, 5 Av. Taha Hussein, 1008 Tunis, Tunisia. Electronic address: aymen_mouelhi@yahoo.fr.
authors.forename: Aymen
authors.initials: A
authors.lastname: Mouelhi
authors.forename: Mounir
authors.initials: M
authors.lastname: Sayadi
authors.forename: Farhat
authors.initials: F
authors.lastname: Fnaiech
authors.forename: Karima
authors.initials: K
authors.lastname: Mrad
authors.forename: Khaled
authors.initials: K
authors.lastname: Ben Romdhane
mesh_terms: D000465:Algorithms; D001940:Breast / Q000378:metabolism / Q000473:pathology; D001943:Breast Neoplasms / Q000378:metabolism / Q000473:pathology; D002467:Cell Nucleus / Q000378:metabolism / Q000473:pathology; D005260:Female; D006801:Humans; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D007150:Immunohistochemistry / Q000379:methods; D009363:Neoplasm Proteins / Q000378:metabolism*; D011960:Receptors, Estrogen / Q000378:metabolism*
chemical_list: D009363:Neoplasm Proteins; D011960:Receptors, Estrogen
keywords: Active contours; Breast tissue images; Cell recognition; Medical image analysis; Neural networks; Nuclear segmentation; Watersheds