title: Distribution of endophytic bacteria in Alopecurus aequalis Sobol and Oxalis corniculata L. from soils contaminated by polycyclic aromatic hydrocarbons.
abstract: The distributions of endophytic bacteria in Alopecurus aequalis Sobol and Oxalis corniculata L. grown in soils contaminated with different levels of polycyclic aromatic hydrocarbons (PAHs) were investigated with polymerase chain reaction followed by denaturing gradient gel electrophoresis technology (PCR-DGGE) and cultivation methods. Twelve types of PAHs, at concentrations varying from 0.16 to 180 mg·kg(-1), were observed in the roots and shoots of the two plants. The total PAH concentrations in Alopecurus aequalis Sobol obtained from three different PAH-contaminated stations were 184, 197, and 304 mg·kg(-1), and the total PAH concentrations in Oxalis corniculata L. were 251, 346, and 600 mg·kg(-1), respectively. The PCR-DGGE results showed that the endophytic bacterial communities in the roots and shoots of the two plants were quite different, although most bacteria belonged to Firmicutes, Proteobacteria, Actinobacteria and Bacteroidetes. A total of 68 endophytic bacterial strains were isolated from different tissues of the two plants and classified into three phyla: Firmicutes, Proteobacteria and Bacteroidetes. In both plants, Bacillus spp. and Pseudomonas spp. were the dominant cultivable populations. With an increase in the PAH pollution level, the diversity and distribution of endophytic bacteria in the two plants changed correspondingly, and the number of cultivable endophytic bacterial strains decreased rapidly. Testing of the isolated endophytic bacteria for tolerance to each type of PAH showed that most isolates could grow well on Luria-Bertani media in the presence of different PAHs, and some isolates were able to grow rapidly on a mineral salt medium with a single PAH as the sole carbon and energy source, indicating that these strains may have the potential to degrade PAHs in plants. This research provides the first insight into the characteristics of endophytic bacterial populations under different PAH pollution levels and provides a species resource for the isolation of PAH-degrading endophytic bacteria.
authors.affiliation: Institute of Organic Contaminant Control and Soil Remediation, College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, People's Republic of China.
authors.forename: Anping
authors.initials: A
authors.lastname: Peng
authors.affiliation: Institute of Organic Contaminant Control and Soil Remediation, College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, People's Republic of China.
authors.forename: Juan
authors.initials: J
authors.lastname: Liu
authors.affiliation: Institute of Organic Contaminant Control and Soil Remediation, College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, People's Republic of China.
authors.forename: Yanzheng
authors.initials: Y
authors.lastname: Gao
authors.affiliation: Institute of Organic Contaminant Control and Soil Remediation, College of Resource and Environmental Sciences, Nanjing Agricultural University, Nanjing, People's Republic of China.
authors.forename: Zeyou
authors.initials: Z
authors.lastname: Chen
mesh_terms: D001419:Bacteria / Q000187:drug effects* / Q000235:genetics / Q000254:growth & development / Q000302:isolation & purification; D001431:Bacteriological Techniques; D044822:Biodiversity; D004269:DNA, Bacterial / Q000032:analysis / Q000235:genetics; D004586:Electrophoresis / Q000379:methods; D060026:Endophytes / Q000187:drug effects* / Q000235:genetics / Q000254:growth & development / Q000302:isolation & purification; D019684:Magnoliopsida / Q000382:microbiology*; D006109:Poaceae / Q000382:microbiology; D011084:Polycyclic Aromatic Hydrocarbons / Q000494:pharmacology*; D016133:Polymerase Chain Reaction / Q000379:methods; D012988:Soil Microbiology; D012989:Soil Pollutants / Q000494:pharmacology*
chemical_list: D004269:DNA, Bacterial; D011084:Polycyclic Aromatic Hydrocarbons; D012989:Soil Pollutants