title: Current clinical application of genomic and proteomic profiling in non-small-cell lung cancer.
abstract: BACKGROUND
  Genomic or proteomic profiling of cancer can be broadly defined as a systematic grouping of cancer based on its genetic or protein makeup. In the management of non-small-cell lung cancer (NSCLC), genomic and proteomic profiling applications have become useful in early disease detection, diagnosis, treatment, and prognostication.
  
  
  METHODS
  We reviewed the recent literature on the applications of genomic and proteomic profiling in NSCLC. Important applications were summarized into those already adopted as standard care and those still under investigation.
  
  
  RESULTS
  For genomic profiling, testing for EGFR mutation and ALK rearrangement has become routine for adenocarcinoma. Multiplex assay and malignancy-risk gene signature are both important applications in development. A test to predict outcome after treatment with an epidermal growth factor rector/tyrosine kinase inhibitor and a screening blood test for lung cancer are being investigated for use in proteomic profiling.
  
  
  CONCLUSIONS
  Genomic profiling is routine in patients with NSCLC, and proteomic profiling shows promise. Additional genomic and proteomic profiling applications may also prove to be useful contributions in the care of these patients.
authors.affiliation: Thoracic Oncology Program, Moffitt Cancer Center, Tampa FL 33612, USA. Tanvett@Moffitt.org.
authors.forename: Tawee
authors.initials: T
authors.lastname: Tanvetyanon
authors.forename: Benjamin C
authors.initials: BC
authors.lastname: Creelan
authors.forename: Alberto A
authors.initials: AA
authors.lastname: Chiappori
mesh_terms: D002289:Carcinoma, Non-Small-Cell Lung / Q000188:drug therapy / Q000235:genetics* / Q000378:metabolism* / Q000473:pathology; D023281:Genomics / Q000379:methods; D006801:Humans; D008175:Lung Neoplasms / Q000188:drug therapy / Q000235:genetics* / Q000378:metabolism* / Q000473:pathology; D040901:Proteomics / Q000379:methods