title: Disparate molecular evolution of two types of repetitive DNAs in the genome of the grasshopper Eyprepocnemis plorans.
abstract: Wide arrays of repetitive DNA sequences form an important part of eukaryotic genomes. These repeats appear to evolve as coherent families, where repeats within a family are more similar to each other than to other orthologous representatives in related species. The continuous homogenization of repeats, through selective and non-selective processes, is termed concerted evolution. Ascertaining the level of variation between repeats is crucial to determining which evolutionary model best explains the homogenization observed for these sequences. Here, for the grasshopper Eyprepocnemis plorans, we present the analysis of intragenomic diversity for two repetitive DNA sequences (a satellite DNA (satDNA) and the 45S rDNA) resulting from the independent microdissection of several chromosomes. Our results show different homogenization patterns for these two kinds of paralogous DNA sequences, with a high between-chromosome structure for rDNA but no structure at all for the satDNA. This difference is puzzling, considering the adjacent localization of the two repetitive DNAs on paracentromeric regions in most chromosomes. The disparate homogenization patterns detected for these two repetitive DNA sequences suggest that several processes participate in the concerted evolution in E. plorans, and that these mechanisms might not work as genome-wide processes but rather as sequence-specific ones.
authors.affiliation: Departamento de Genética, Universidad de Granada, Granada, Spain.
authors.forename: M
authors.initials: M
authors.lastname: Teruel
authors.affiliation: Departamento de Genética, Universidad de Granada, Granada, Spain.
authors.forename: F J
authors.initials: FJ
authors.lastname: Ruíz-Ruano
authors.affiliation: Departamento de Biología Experimental, Universidad de Jaén, Jaén, Spain.
authors.forename: J A
authors.initials: JA
authors.lastname: Marchal
authors.affiliation: Departamento de Biología Experimental, Universidad de Jaén, Jaén, Spain.
authors.forename: A
authors.initials: A
authors.lastname: Sánchez
authors.affiliation: Departamento de Genética, Universidad de Granada, Granada, Spain.
authors.forename: J
authors.initials: J
authors.lastname: Cabrero
authors.affiliation: Departamento de Genética, Universidad de Granada, Granada, Spain.
authors.forename: J Pm
authors.initials: JP
authors.lastname: Camacho
authors.affiliation: Departamento de Genética, Universidad de Granada, Granada, Spain.
authors.forename: F
authors.initials: F
authors.lastname: Perfectti
mesh_terms: D000818:Animals; D001482:Base Composition / Q000235:genetics; D001483:Base Sequence; D004275:DNA, Ribosomal / Q000737:chemistry / Q000145:classification / Q000235:genetics*; D021903:DNA, Ribosomal Spacer / Q000737:chemistry / Q000235:genetics; D004276:DNA, Satellite / Q000737:chemistry / Q000145:classification / Q000235:genetics*; D019143:Evolution, Molecular; D005260:Female; D014644:Genetic Variation; D016678:Genome / Q000235:genetics*; D006110:Grasshoppers / Q000235:genetics*; D006239:Haplotypes; D008297:Male; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D010802:Phylogeny; D012340:RNA, Ribosomal, 5.8S / Q000235:genetics; D012091:Repetitive Sequences, Nucleic Acid / Q000235:genetics*; D017422:Sequence Analysis, DNA; D012689:Sequence Homology, Nucleic Acid
chemical_list: D004275:DNA, Ribosomal; D021903:DNA, Ribosomal Spacer; D004276:DNA, Satellite; D012340:RNA, Ribosomal, 5.8S