title: Endosulfan induced alteration in bacterial protein profile and RNA yield of Klebsiella sp. M3, Achromobacter sp. M6, and Rhodococcus sp. M2.
abstract: Three bacterial strains identified as Klebsiella sp. M3, Achromobacter sp. M6 and Rhodococcus sp. M2 were isolated by soil enrichment with endosulfan followed by shake flask enrichment technique. They were efficiently degrading endosulfan in the NSM (non sulfur medium) broth. Degradation of endosulfan was faster with the cell free extract of bacterial cells grown in the sulfur deficient medium (NSM) supplemented with endosulfan than that of nutrient rich medium (Luria Bertani). In the cell free extract of NSM supplemented with endosulfan as sole sulfur source, a unique band was visualized on SDS-PAGE but not with magnesium sulfate as the sole sulfur source in NSM and LB with endosulfan. Expression of a unique polypeptide band was speculated to be induced by endosulfan under sulfur starved condition. These unique polypeptide bands were identified as OmpK35 protein, sulfate binding protein and outer membrane porin protein, respectively, in Klebsiella sp. M3, Achromobacter sp. M6 and Rhodococcus sp. M2. Endosulfan showed dose dependent negative effect on total RNA yield of bacterial strains in nutrient rich medium. Absence of plasmid DNA indicated the presence of endosulfan metabolizing gene on genomic DNA.
authors.affiliation: Department of Zoology, University of Delhi, Delhi 110007, India. Electronic address: Madhu.20008@gmail.com.
authors.forename: Madhu
authors.initials: M
authors.lastname: Singh
authors.affiliation: Department of Zoology, University of Delhi, Delhi 110007, India. Electronic address: dileepksingh@gmail.com.
authors.forename: Dileep Kumar
authors.initials: DK
authors.lastname: Singh
mesh_terms: D042402:Achromobacter / Q000235:genetics / Q000378:metabolism*; D001426:Bacterial Proteins / Q000378:metabolism*; D001673:Biodegradation, Environmental; D004726:Endosulfan / Q000378:metabolism*; D007709:Klebsiella / Q000235:genetics / Q000378:metabolism*; D010455:Peptides / Q000378:metabolism; D018272:Porins / Q000378:metabolism; D012329:RNA, Bacterial / Q000032:analysis; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012240:Rhodococcus / Q000235:genetics / Q000378:metabolism*; D012988:Soil Microbiology; D012989:Soil Pollutants / Q000378:metabolism*
chemical_list: D001426:Bacterial Proteins; D010455:Peptides; D018272:Porins; D012329:RNA, Bacterial; D012336:RNA, Ribosomal, 16S; D012989:Soil Pollutants; D004726:Endosulfan
keywords: Cell free extract; Degradation; Endosulfan; Non-sulfur medium; Nutrient rich medium