title: The development of a novel high throughput computational tool for studying individual and collective cellular migration.
abstract: Understanding how cells migrate individually and collectively during development and cancer metastasis can be significantly aided by a computation tool to accurately measure not only cellular migration speed, but also migration direction and changes in migration direction in a temporal and spatial manner. We have developed such a tool for cell migration researchers, named Pathfinder, which is capable of simultaneously measuring the migration speed, migration direction, and changes in migration directions of thousands of cells both instantaneously and over long periods of time from fluorescence microscopy data. Additionally, we demonstrate how the Pathfinder software can be used to quantify collective cell migration. The novel capability of the Pathfinder software to measure the changes in migration direction of large populations of cells in a spatiotemporal manner will aid cellular migration research by providing a robust method for determining the mechanisms of cellular guidance during individual and collective cell migration.
authors.affiliation: 1 Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, United States of America.
authors.forename: Douglas A
authors.initials: DA
authors.lastname: Chapnick
authors.affiliation: 1 Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, United States of America.
authors.forename: Jeremy
authors.initials: J
authors.lastname: Jacobsen
authors.affiliation: 1 Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, United States of America.
authors.forename: Xuedong
authors.initials: X
authors.lastname: Liu
mesh_terms: D002460:Cell Line; D002465:Cell Movement; D006801:Humans; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D008856:Microscopy, Fluorescence; D012984:Software; D013997:Time Factors