title: Use of the VNTR typing technique to determine the origin of Mycobacterium tuberculosis strains isolated from Filipino patients in Korea.
abstract: With increasing international interchange of personnel, international monitoring is necessary to decrease tuberculosis incidence in the world. This study aims to develop a new tool to determine origin of Mycobacterium tuberculosis strains isolated from Filipino patients living in Korea. Thirty-two variable number tandem repeat (VNTR) loci were used for discrimination of 50 Filipino M. tuberculosis strains isolated in the Philippines, 317 Korean strains isolated in Korea, and 8 Filipino strains isolated in Korea. We found that the VNTR loci 0580, 0960, 2531, 2687, 2996, 0802, 2461, 2163a, 4052, 0424, 1955, 2074, 2347, 2401, 3171, 3690, 2372, 3232, and 4156 had different mode among copy numbers or exclusively distinct copy number in VNTR typing between Filipino and Korean M. tuberculosis strains. When these differences of the VNTR loci were applied to 8 Filipino M. tuberculosis strains isolated in Korea, 6 of them revealed Filipino type while 2 of them had Korean type. Using the differences of mode or repeated number of VNTR loci were very useful in distinguishing the Filipino strain from Korean strain.
authors.affiliation: Korean Institute of Tuberculosis, 168-5 Osongsangmyung 4 ro, Osongup, Cheongwongun, Chungbuk, 363-954, Republic of Korea.
authors.forename: Jihye
authors.initials: J
authors.lastname: Lee
authors.forename: Thelma E
authors.initials: TE
authors.lastname: Tupasi
authors.forename: Young Kil
authors.initials: YK
authors.lastname: Park
mesh_terms: D004269:DNA, Bacterial / Q000235:genetics; D014644:Genetic Variation; D005838:Genotype; D006801:Humans; D018598:Minisatellite Repeats / Q000235:genetics*; D058889:Molecular Typing / Q000379:methods*; D009169:Mycobacterium tuberculosis / Q000145:classification / Q000235:genetics*; D010679:Philippines; D056910:Republic of Korea / Q000208:ethnology; D014397:Tuberculosis, Pulmonary / Q000382:microbiology*
chemical_list: D004269:DNA, Bacterial