title: Complete mitochondrial genome of Yellow-browed warbler Phylloscopus inornatus inornatus (Passeriformes: Sylviidae).
abstract: Yellow-browed warbler Phylloscopus inornatus inornatus (Passeriformes: Sylviidae) is a small insectivorous leaf-gleaning bird which breeds in forests of the east Palaearctic. In this study, we used PCR-based method to determine the complete mitochondrial genome (mtDNA) of this warbler species. The complete mtDNA is a 16,875 bp circular molecule, containing 37 typical genes and an extra pseudo-control region. The gene order differs from the standard gene order in birds, but similar to genus Sylvia and Acrocephalus, which has the remnant CR2 gene order. All protein-coding genes start with a typical ATG codon. The termination codon is usually the standard TAA, but may be TAG (Cyt b and ND6), AGG (COI) or incomplete T-(COIII and ND4). All tRNAs have the typical clover-leaf structure, except the dihydrouridine (DHU) arm of tRNASer (AGN) and tRNALys (CUN), which forms a simple loop. The non-coding region contains some intergenic spacers, a control region and an extra pseudo-control region.
authors.affiliation: a Institute of Biodiversity and Wetland Ecology, School of Resources and Environmental Engineering, Anhui University , Hefei , P.R. China .|b Anhui Biodiversity Information Center , Hefei , P.R. China , and.
authors.forename: Hui
authors.initials: H
authors.lastname: Qing
authors.affiliation: a Institute of Biodiversity and Wetland Ecology, School of Resources and Environmental Engineering, Anhui University , Hefei , P.R. China .|b Anhui Biodiversity Information Center , Hefei , P.R. China , and.
authors.forename: Gang
authors.initials: G
authors.lastname: Liu
authors.affiliation: a Institute of Biodiversity and Wetland Ecology, School of Resources and Environmental Engineering, Anhui University , Hefei , P.R. China .|b Anhui Biodiversity Information Center , Hefei , P.R. China , and.
authors.forename: Lizhi
authors.initials: L
authors.lastname: Zhou
authors.affiliation: a Institute of Biodiversity and Wetland Ecology, School of Resources and Environmental Engineering, Anhui University , Hefei , P.R. China .|b Anhui Biodiversity Information Center , Hefei , P.R. China , and.
authors.forename: Jinghua
authors.initials: J
authors.lastname: Wang
authors.affiliation: a Institute of Biodiversity and Wetland Ecology, School of Resources and Environmental Engineering, Anhui University , Hefei , P.R. China .|b Anhui Biodiversity Information Center , Hefei , P.R. China , and.
authors.forename: Lunyue
authors.initials: L
authors.lastname: Li
authors.affiliation: a Institute of Biodiversity and Wetland Ecology, School of Resources and Environmental Engineering, Anhui University , Hefei , P.R. China .|b Anhui Biodiversity Information Center , Hefei , P.R. China , and.
authors.forename: Bo
authors.initials: B
authors.lastname: Li
authors.affiliation: c Department of Biology and Environmental Sciences , University of Gothenburg , Göteborg , Sweden.
authors.forename: Urban
authors.initials: U
authors.lastname: Olsson
mesh_terms: D000818:Animals; D001482:Base Composition; D023061:Gene Order; D059646:Genome Size; D054629:Genome, Mitochondrial; D008969:Molecular Sequence Data; D017422:Sequence Analysis, DNA / Q000379:methods*; D020308:Songbirds / Q000235:genetics*
keywords: Genomic rearrangements; Phylloscopus inornatus inornatus; mitochondrial genome; pseudo-control region