Modeling the effects of light and sucrose on in vitro propagated plants: a multiscale system analysis using artificial intelligence technology.
BACKGROUND
Plant acclimation is a highly complex process, which cannot be fully understood by analysis at any one specific level (i.e. subcellular, cellular or whole plant scale). Various soft-computing techniques, such as neural networks or fuzzy logic, were designed to analyze complex multivariate data sets and might be used to model large such multiscale data sets in plant biology.


RESULTS
In this study we assessed the effectiveness of applying neuro-fuzzy logic to modeling the effects of light intensities and sucrose content/concentration in the in vitro culture of kiwifruit on plant acclimation, by modeling multivariate data from 14 parameters at different biological scales of organization. The model provides insights through application of 14 sets of straightforward rules and indicates that plants with lower stomatal aperture areas and higher photoinhibition and photoprotective status score best for acclimation. The model suggests the best condition for obtaining higher quality acclimatized plantlets is the combination of 2.3% sucrose and photonflux of 122-130 µmol m(-2) s(-1).


CONCLUSIONS
Our results demonstrate that artificial intelligence models are not only successful in identifying complex non-linear interactions among variables, by integrating large-scale data sets from different levels of biological organization in a holistic plant systems-biology approach, but can also be used successfully for inferring new results without further experimental work.
Applied Plant and Soil Biology, Faculty of Biology, University of Vigo, Vigo, Spain ; Laboratori de Fisiologia Vegetal, Departament de Biologia, Universitat de les Illes Balears - Instituto Mediterráneo de Estudios Avanzados (UIB-IMEDEA), Palma de Mallorca, Spain.
Jorge
J
Gago
Applied Plant and Soil Biology, Faculty of Biology, University of Vigo, Vigo, Spain.
Lourdes
L
Martínez-Núñez
Department of Pharmacy and Pharmaceutical Technology, Faculty of Pharmacy, University of Santiago, Santiago de Compostela, Spain.
Mariana
M
Landín
Laboratori de Fisiologia Vegetal, Departament de Biologia, Universitat de les Illes Balears - Instituto Mediterráneo de Estudios Avanzados (UIB-IMEDEA), Palma de Mallorca, Spain.
Jaume
J
Flexas
Applied Plant and Soil Biology, Faculty of Biology, University of Vigo, Vigo, Spain.
Pedro P
PP
Gallego
D000064:Acclimatization; D029042:Actinidia / Q000502:physiology*; D001185:Artificial Intelligence; D003198:Computer Simulation; D017143:Fuzzy Logic; D008027:Light; D008954:Models, Biological; D016571:Neural Networks, Computer; D013395:Sucrose / Q000378:metabolism*
D013395:Sucrose