CoNtRol: an open source framework for the analysis of chemical reaction networks.
We introduce CoNtRol, a web-based framework for analysis of chemical reaction networks (CRNs). It is designed to be both extensible and simple to use, complementing existing CRN-related tools. CoNtRol currently implements a number of necessary and/or sufficient structural tests for multiple equilibria, stable periodic orbits, convergence to equilibria and persistence, with the potential for incorporation of further tests.


METHODS
Reference implementation: reaction-networks.net/control/. Source code and binaries, released under the GPLv3: reaction-networks.net/control/download/. Documentation: reaction-networks.net/wiki/CoNtRol.
Department of Mathematics, University of Portsmouth, Portsmouth PO1 3HF, UK, Computer Science Department, Technical University of Cluj-Napoca, 400027 Cluj-Napoca, Romania and Department of Mathematics, West Virginia University, Morgantown, WV 26506-6310, USA.
Pete
P
Donnell
Department of Mathematics, University of Portsmouth, Portsmouth PO1 3HF, UK, Computer Science Department, Technical University of Cluj-Napoca, 400027 Cluj-Napoca, Romania and Department of Mathematics, West Virginia University, Morgantown, WV 26506-6310, USA.
Murad
M
Banaji
Department of Mathematics, University of Portsmouth, Portsmouth PO1 3HF, UK, Computer Science Department, Technical University of Cluj-Napoca, 400027 Cluj-Napoca, Romania and Department of Mathematics, West Virginia University, Morgantown, WV 26506-6310, USA.
Anca
A
Marginean
Department of Mathematics, University of Portsmouth, Portsmouth PO1 3HF, UK, Computer Science Department, Technical University of Cluj-Napoca, 400027 Cluj-Napoca, Romania and Department of Mathematics, West Virginia University, Morgantown, WV 26506-6310, USA.
Casian
C
Pantea
D020407:Internet; D008956:Models, Chemical; D012984:Software