title: Accurate zygote-specific discrimination of single-nucleotide polymorphisms using microfluidic electrochemical DNA melting curves.
abstract: We report the first electrochemical system for the detection of single-nucleotide polymorphisms (SNPs) that can accurately discriminate homozygous and heterozygous genotypes using microfluidics technology. To achieve this, our system performs real-time melting-curve analysis of surface-immobilized hybridization probes. As an example, we used our sensor to analyze two SNPs in the apolipoprotein E (ApoE) gene, where homozygous and heterozygous mutations greatly affect the risk of late-onset Alzheimer's disease. Using probes specific for each SNP, we simultaneously acquired melting curves for probe-target duplexes at two different loci and thereby accurately distinguish all six possible ApoE allele combinations. Since the design of our device and probes can be readily adapted for targeting other loci, we believe that our method offers a modular platform for the diagnosis of SNP-based diseases and personalized medicine.
authors: Department of Mechanical Engineering, University of California Santa Barbara (USA).
authors: Allen H J
authors: AH
authors: Yang
authors: Kuangwen
authors: K
authors: Hsieh
authors: Adriana S
authors: AS
authors: Patterson
authors: B Scott
authors: BS
authors: Ferguson
authors: Michael
authors: M
authors: Eisenstein
authors: Kevin W
authors: KW
authors: Plaxco
authors: H Tom
authors: HT
authors: Soh
mesh_terms: D004247:DNA / Q000737:chemistry*; D004563:Electrochemistry; D006801:Humans; D046210:Microfluidic Analytical Techniques / Q000295:instrumentation / Q000379:methods*; D044085:Microfluidics; D057089:Pathology, Molecular; D020641:Polymorphism, Single Nucleotide; D015053:Zygote / Q000166:cytology / Q000378:metabolism*
chemical_list: D004247:DNA
keywords: DNA; electrochemistry; microfluidics; molecular diagnostics