title: The robustness and evolvability of transcription factor binding sites.
abstract: Robustness, the maintenance of a character in the presence of genetic change, can help preserve adaptive traits but also may hinder evolvability, the ability to bring forth novel adaptations. We used genotype networks to analyze the binding site repertoires of 193 transcription factors from mice and yeast, providing empirical evidence that robustness and evolvability need not be conflicting properties. Network vertices represent binding sites where two sites are connected if they differ in a single nucleotide. We show that the binding sites of larger genotype networks are not only more robust, but the sequences adjacent to such networks can also bind more transcription factors, thus demonstrating that robustness can facilitate evolvability.
authors.affiliation: University of Zurich, Institute of Evolutionary Biology and Environmental Studies, Zurich, Switzerland.
authors.forename: Joshua L
authors.initials: JL
authors.lastname: Payne
authors.forename: Andreas
authors.initials: A
authors.lastname: Wagner
mesh_terms: D000818:Animals; D001483:Base Sequence; D001665:Binding Sites / Q000235:genetics; D053263:Gene Regulatory Networks; D051379:Mice; D009154:Mutation; D029701:Saccharomyces cerevisiae Proteins / Q000737:chemistry; D014157:Transcription Factors / Q000737:chemistry*; D014158:Transcription, Genetic
chemical_list: D029701:Saccharomyces cerevisiae Proteins; D014157:Transcription Factors