title: Legionella detection by culture and qPCR: Comparing apples and oranges.
abstract: Legionella spp. are the causative agent of Legionnaire's disease and an opportunistic pathogen of significant public health concern. Identification and quantification from environmental sources is crucial for identifying outbreak origins and providing sufficient information for risk assessment and disease prevention. Currently there are a range of methods for Legionella spp. quantification from environmental sources, but the two most widely used and accepted are culture and real-time polymerase chain reaction (qPCR). This paper provides a review of these two methods and outlines their advantages and limitations. Studies from the last 10 years which have concurrently used culture and qPCR to quantify Legionella spp. from environmental sources have been compiled. 26/28 studies detected Legionella at a higher rate using qPCR compared to culture, whilst only one study detected equivalent levels of Legionella spp. using both qPCR and culture. Aggregating the environmental samples from all 28 studies, 2856/3967 (72%) tested positive for the presence of Legionella spp. using qPCR and 1331/3967 (34%) using culture. The lack of correlation between methods highlights the need to develop an acceptable standardized method for quantification that is sufficient for risk assessment and management of this human pathogen.
authors.affiliation: a Department of Health and the Environment , Flinders University , Adelaide , Australia.
authors.forename: Harriet
authors.initials: H
authors.lastname: Whiley
authors.affiliation: a Department of Health and the Environment , Flinders University , Adelaide , Australia.
authors.forename: Michael
authors.initials: M
authors.lastname: Taylor
mesh_terms: D058491:Bacterial Load / Q000379:methods; D004783:Environmental Microbiology; D006801:Humans; D007875:Legionella / Q000235:genetics* / Q000302:isolation & purification; D007876:Legionellosis / Q000175:diagnosis* / Q000382:microbiology*; D060888:Real-Time Polymerase Chain Reaction / Q000379:methods
keywords: Culture; L. pneumophila; Legionella spp.; PCR; environmental samples; public health; qPCR; risk assessment