title: Enrichment of amino acid-oxidizing, acetate-reducing bacteria.
abstract: In anaerobic condition, amino acids are oxidatively deaminated, and decarboxylated, resulting in the production of volatile fatty acids. In this process, excess electrons are produced and their consumption is necessary for the accomplishment of amino acid degradation. In this study, we anaerobically constructed leucine-degrading enrichment cultures from three different environmental samples (compost, excess sludge, and rice field soil) in order to investigate the diversity of electron-consuming reaction coupled to amino acid oxidation. Constructed enrichment cultures oxidized leucine to isovalerate and their activities were strongly dependent on acetate. Analysis of volatile fatty acids (VFAs) profiles and community structure analysis during batch culture of each enrichment indicated that Clostridium cluster I coupled leucine oxidation to acetate reduction in the enrichment from the compost and the rice field soil. In these cases, acetate was reduced to butyrate. On the other hand, Clostridium cluster XIVb coupled leucine oxidation to acetate reduction in the enrichment from the excess sludge. In this case, acetate was reduced to propionate. To our surprise, the enrichment from rice field soil oxidized leucine even in the absence of acetate and produced butyrate. The enrichment would couple leucine oxidation to reductive butyrate synthesis from CO2. The coupling reaction would be achieved based on trophic link between hydrogenotrophic acetogenic bacteria and acetate-reducing bacteria by sequential reduction of CO2 and acetate. Our study suggests anaerobic degradation of amino acids is achieved yet-to-be described reactions.
authors.affiliation: Department of Biotechnology, Graduate School of Agriculture and Life Sciences, The University of Graduate School of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.
authors.forename: Makoto
authors.initials: M
authors.lastname: Ato
authors.affiliation: Department of Biotechnology, Graduate School of Agriculture and Life Sciences, The University of Graduate School of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan. Electronic address: amishii@mail.ecc.u-tokyo.ac.jp.
authors.forename: Masaharu
authors.initials: M
authors.lastname: Ishii
authors.affiliation: Department of Biotechnology, Graduate School of Agriculture and Life Sciences, The University of Graduate School of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan.
authors.forename: Yasuo
authors.initials: Y
authors.lastname: Igarashi
mesh_terms: D000085:Acetates / Q000378:metabolism*; D000596:Amino Acids / Q000378:metabolism*; D000693:Anaerobiosis; D002087:Butyrates / Q000378:metabolism; D003013:Clostridium / Q000302:isolation & purification / Q000378:metabolism*; D005232:Fatty Acids, Volatile / Q000378:metabolism; D010084:Oxidation-Reduction; D011422:Propionates / Q000378:metabolism; D012722:Sewage / Q000382:microbiology; D012987:Soil; D012988:Soil Microbiology
chemical_list: D000085:Acetates; D000596:Amino Acids; D002087:Butyrates; D005232:Fatty Acids, Volatile; D011422:Propionates; D012722:Sewage; D012987:Soil
keywords: Acetate reduction; Amino acid degradation; Anaerobic bacteria; Bacterial community; Enrichment culture