title: Expanding knowledge of the Rubisco kinetics variability in plant species: environmental and evolutionary trends.
abstract: The present study characterizes the kinetic properties of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from 28 terrestrial plant species, representing different phylogenetic lineages, environmental adaptations and photosynthetic mechanisms. Our findings confirm that past atmospheric CO(2)/O(2) ratio changes and present environmental pressures have influenced Rubisco kinetics. One evolutionary adaptation to a decreasing atmospheric CO(2)/O(2) ratio has been an increase in the affinity of Rubisco for CO(2) (Kc falling), and a consequent decrease in the velocity of carboxylation (kcat (c)), which in turn has been ameliorated by an increase in the proportion of leaf protein accounted by Rubisco. The trade-off between K(c) and k(cat)(c) was not universal among the species studied and deviations from this relationship occur in extant forms of Rubisco. In species adapted to particular environments, including carnivorous plants, crassulacean acid metabolism species and C(3) plants from aquatic and arid habitats, Rubisco has evolved towards increased efficiency, as demonstrated by a higher k(cat)(c)/K(c) ratio. This variability in kinetics was related to the amino acid sequence of the Rubisco large subunit. Phylogenetic analysis identified 13 residues under positive selection during evolution towards specific Rubisco kinetic parameters. This crucial information provides candidate amino acid replacements, which could be implemented to optimize crop photosynthesis under a range of environmental conditions.
authors.affiliation: Research Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears, Palma, Spain.
authors.forename: Jeroni
authors.initials: J
authors.lastname: Galmés
authors.forename: Maxim V
authors.initials: MV
authors.lastname: Kapralov
authors.forename: P John
authors.initials: PJ
authors.lastname: Andralojc
authors.forename: Miquel À
authors.initials: MÀ
authors.lastname: Conesa
authors.forename: Alfred J
authors.initials: AJ
authors.lastname: Keys
authors.forename: Martin A J
authors.initials: MA
authors.lastname: Parry
authors.forename: Jaume
authors.initials: J
authors.lastname: Flexas
mesh_terms: D000596:Amino Acids / Q000378:metabolism; D001499:Bayes Theorem; D005075:Biological Evolution; D002245:Carbon Dioxide / Q000378:metabolism; D004777:Environment; D007700:Kinetics; D010802:Phylogeny; D010944:Plants / Q000201:enzymology*; D021122:Protein Subunits / Q000378:metabolism; D012273:Ribulose-Bisphosphate Carboxylase / Q000378:metabolism*; D012641:Selection, Genetic; D013045:Species Specificity; D013696:Temperature
chemical_list: D000596:Amino Acids; D021122:Protein Subunits; D002245:Carbon Dioxide; D012273:Ribulose-Bisphosphate Carboxylase
keywords: evolution; photosynthesis; stress