title: Evidence of disorder in biological molecules from single molecule pulling experiments.
abstract: Heterogeneity in biological molecules, resulting in molecule-to-molecule variations in their dynamics and function, is an emerging theme. To elucidate the consequences of heterogeneous behavior at the single molecule level, we propose an exactly solvable model in which the unfolding rate due to mechanical force depends parametrically on an auxiliary variable representing an entropy barrier arising from fluctuations in internal dynamics. When the rate of fluctuations--a measure of dynamical disorder--is comparable to or smaller than the rate of force-induced unbinding, we show that there are two experimentally observable consequences: nonexponential survival probability at constant force, and a heavy-tailed rupture force distribution at constant loading rate. By fitting our analytical expressions to data from single molecule pulling experiments on proteins and DNA, we quantify the extent of disorder. We show that only by analyzing data over a wide range of forces and loading rates can the role of disorder due to internal dynamics be quantitatively assessed.
authors.affiliation: Korea Institute for Advanced Study, Seoul 130-722, Korea.
authors.forename: Changbong
authors.initials: C
authors.lastname: Hyeon
authors.affiliation: Institute for Physical Science and Technology, University of Maryland, College Park, Maryland 20742, USA.
authors.forename: Michael
authors.initials: M
authors.lastname: Hinczewski
authors.affiliation: Institute for Physical Science and Technology, University of Maryland, College Park, Maryland 20742, USA.
authors.forename: D
authors.initials: D
authors.lastname: Thirumalai
mesh_terms: D004247:DNA / Q000737:chemistry*; D008954:Models, Biological; D008956:Models, Chemical; D008958:Models, Molecular; D009690:Nucleic Acid Conformation; D011487:Protein Conformation; D011506:Proteins / Q000737:chemistry*; D013816:Thermodynamics
chemical_list: D011506:Proteins; D004247:DNA
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