title: Identification of manipulated variables for a glycosylation control strategy.
abstract: N-linked glycan distribution affects important end-use characteristics such as the bioactivity and efficacy of many therapeutic proteins, (including monoclonal antibodies), in vivo. Yet, obtaining desired glycan distributions consistently during batch-to-batch production can be challenging for biopharmaceutical manufacturers. While an appropriately implemented on-line glycosylation control strategy during production can help to ensure a consistent glycan distribution, to date no such strategies have been reported. Our goal is to develop and validate a comprehensive strategy for effective on-line control of glycosylation, the successful achievement of which requires first identifying appropriate manipulated variables that can be used to direct the glycan distribution to a desired state. While various culture conditions such as bioreactor process variables, media type, and media supplements have been shown to affect the glycan distribution, in this study we focus on the latter. Specifically, we implemented a statistically designed series of experiments to determine the significant main effects (as well as interaction effects) of media supplementation with manganese, galactose, ammonia and found that each had significant effects on certain glycans. We also include data indicating the glycosylation enzyme gene transcript levels as well as the intracellular nucleotide sugar concentrations in the presence of the media supplements to provide insight into the intracellular conditions that may be contributing to the changes in glycan distribution. The acquired experimental data sets were then used to identify which glycans can be controlled by the media supplements and to what degree. We determined that MnCl2 can be used as a manipulated variable to increase the relative abundance of M51 and decrease FA2 simultaneously, and galactose can be used as a manipulated variable to increase the relative abundance of FA2G1 and decrease FA2 and A2 simultaneously.
authors.affiliation: Department of Chemical and Biomolecular Engineering, University of Delaware, 150 Academy Street, Newark, Delaware, 19716.
authors.forename: Melissa M
authors.initials: MM
authors.lastname: St Amand
authors.forename: Devesh
authors.initials: D
authors.lastname: Radhakrishnan
authors.forename: Anne S
authors.initials: AS
authors.lastname: Robinson
authors.forename: Babatunde A
authors.initials: BA
authors.lastname: Ogunnaike
mesh_terms: D000641:Ammonia / Q000378:metabolism; D000818:Animals; D019149:Bioreactors; D001709:Biotechnology / Q000379:methods; D016466:CHO Cells; D018929:Cell Culture Techniques / Q000379:methods*; D006224:Cricetinae; D003412:Cricetulus; D003470:Culture Media / Q000378:metabolism; D005690:Galactose / Q000378:metabolism; D015971:Gene Expression Regulation, Enzymologic; D006031:Glycosylation; D007074:Immunoglobulin G / Q000737:chemistry / Q000378:metabolism*; D008345:Manganese / Q000378:metabolism; D011134:Polysaccharides / Q000032:analysis* / Q000378:metabolism
chemical_list: D003470:Culture Media; D007074:Immunoglobulin G; D011134:Polysaccharides; D008345:Manganese; D000641:Ammonia; D005690:Galactose
keywords: controllability; design of experiments (DoE); enzyme expression; glycosylation; media supplements; monoclonal antibody; nucleotide sugar