title: Fluorescence-based quasicontinuous and in situ monitoring of biofilm formation dynamics in natural marine environments.
abstract: Analyzing the dynamics of biofilm formation helps to deepen our understanding of surface colonization in natural environments. While methods for screening biofilm formation in the laboratory are well established, studies in marine environments have so far been based upon destructive analysis of individual samples and provide only discontinuous snapshots of biofilm establishment. In order to explore the development of biofilm over time and under various biotic and abiotic conditions, we applied a recently developed optical biofilm sensor to quasicontinuously analyze marine biofilm dynamics in situ. Using this technique in combination with microscope-assisted imaging, we investigated biofilm formation from its beginning to mature multispecies biofilms. In contrast to laboratory studies on biofilm formation, a smooth transition from initial attachment to colony formation and exponential growth could not be observed in the marine environment. Instead, initial attachment was followed by an adaptation phase of low growth and homogeneously distributed solitary bacterial cells. Moreover, we observed a diurnal variation of biofilm signal intensity, suggesting a transient state of biofilm formation of bacteria. Overall, the biofilm formation dynamics could be modeled by three consecutive development stages attributed to initial bacterial attachment, bacterial growth, and attachment and growth of unicellular eukaryotic microorganisms. Additional experiments showed that the presence of seaweed considerably shortened the adaptation phase in comparison with that on control surfaces but yielded similar growth rates. The outlined examples highlight the advantages of a quasicontinuous in situ detection that enabled, for the first time, the exploration of the initial attachment phase and the diurnal variation during biofilm formation in natural ecosystems.
authors.affiliation: GEOMAR-Helmholtz Centre for Ocean Research Kiel, Kiel, Germany University of York, York, United Kingdom matthias.fischer@york.ac.uk.
authors.forename: M
authors.initials: M
authors.lastname: Fischer
authors.affiliation: Institute of Physical Chemistry and KMS Kiel Marine Science-Centre for Interdisciplinary Marine Science, Christian Albrechts University Kiel, Kiel, Germany.
authors.forename: G
authors.initials: G
authors.lastname: Friedrichs
authors.affiliation: Centre for Marine Bio-Innovation, The University of New South Wales, Sydney, New South Wales, Australia.
authors.forename: T
authors.initials: T
authors.lastname: Lachnit
mesh_terms: D001419:Bacteria / Q000737:chemistry / Q000235:genetics / Q000254:growth & development / Q000302:isolation & purification; D018407:Bacterial Physiological Phenomena; D018441:Biofilms / Q000254:growth & development; D017753:Ecosystem; D008856:Microscopy, Fluorescence; D012623:Seawater / Q000382:microbiology*
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