title: RNASeqGUI: a GUI for analysing RNA-Seq data.
abstract: We present RNASeqGUI R package, a graphical user interface (GUI) for the identification of differentially expressed genes across multiple biological conditions. This R package includes some well-known RNA-Seq tools, available at www.bioconductor.org. RNASeqGUI package is not just a collection of some known methods and functions, but it is designed to guide the user during the entire analysis process. RNASeqGUI package is mainly addressed to those users who have little experience with command-line software. Therefore, thanks to RNASeqGUI, they can conduct analogous analyses using this simple graphical interface. Moreover, RNASeqGUI is also helpful for those who are expert R-users because it speeds up the usage of the included RNASeq methods drastically.
  
  
  METHODS
  RNASeqGUI package needs the RGTK2 graphical library to run. This package is open source and is freely available under General Public License at http://bioinfo.na.iac.cnr.it/RNASeqGUI/Download.
  
  
  BACKGROUND
  Supplementary data are available at Bioinformatics online.
authors.affiliation: Istituto per le Applicazoni del Calcolo, CNR, 80131, Napoli, Italy.
authors.forename: Francesco
authors.initials: F
authors.lastname: Russo
authors.affiliation: Istituto per le Applicazoni del Calcolo, CNR, 80131, Napoli, Italy.
authors.forename: Claudia
authors.initials: C
authors.lastname: Angelini
mesh_terms: D020869:Gene Expression Profiling / Q000379:methods*; D017423:Sequence Analysis, RNA / Q000379:methods*; D012984:Software; D014584:User-Computer Interface