title: Bacterial community composition and diversity of five different permafrost-affected soils of Northeast Greenland.
abstract: Greenland is one of the regions of interest with respect to climate change and global warming in the Northern Hemisphere. Little is known about the structure and diversity of the terrestrial bacterial communities in ice-free areas in northern Greenland. These soils are generally poorly developed and usually carbon- and nitrogen-limited. Our goal was to provide the first insights into the soil bacterial communities from five different sites in Northeast Greenland using culture-independent and culture-dependent methods. The comparison of environmental and biological data showed that the soil bacterial communities are diverse and significantly pH-dependent. The most frequently detected OTUs belonged to the phyla Acidobacteria, Bacteroidetes and (Alpha-, Beta-, Delta-) Proteobacteria. Low pH together with higher nitrogen and carbon concentrations seemed to support the occurrence of (Alpha-, Beta-, Delta-) Proteobacteria (at the expense of Acidobacteria), whereas Bacteroidetes were predominant at higher values of soil pH. Our study indicates that pH is the main factor for shaping bacterial community, but carbon and nitrogen concentrations as well may become important, especially for selecting oligotrophic microorganisms.
authors.affiliation: Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Potsdam, Germany.
authors.forename: Lars
authors.initials: L
authors.lastname: Ganzert
authors.forename: Felizitas
authors.initials: F
authors.lastname: Bajerski
authors.forename: Dirk
authors.initials: D
authors.lastname: Wagner
mesh_terms: D061271:Acidobacteria / Q000235:genetics* / Q000254:growth & development; D041963:Bacteroidetes / Q000235:genetics* / Q000254:growth & development; D044822:Biodiversity; D002244:Carbon / Q000737:chemistry; D006116:Greenland; D052836:Heterotrophic Processes; D006863:Hydrogen-Ion Concentration; D007053:Ice; D008969:Molecular Sequence Data; D058889:Molecular Typing; D009584:Nitrogen / Q000737:chemistry; D010802:Phylogeny; D012150:Polymorphism, Restriction Fragment Length; D020560:Proteobacteria / Q000235:genetics* / Q000254:growth & development; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012987:Soil / Q000737:chemistry; D012988:Soil Microbiology
chemical_list: D007053:Ice; D012336:RNA, Ribosomal, 16S; D012987:Soil; D002244:Carbon; D009584:Nitrogen
keywords: Arctic; Northeast Greenland; T-RFLP; active layer soil; bacterial community