title: Functional redundancy and/or ongoing pseudogenization among F-box protein genes expressed in Arabidopsis male gametophyte.
abstract: F-box protein genes family is one of the largest gene families in plants, with almost 700 predicted genes in the model plant Arabidopsis. F-box proteins are key components of the ubiquitin proteasome system that allows targeted protein degradation. Transcriptome analyses indicate that half of these F-box protein genes are found expressed in microspore and/or pollen, i.e., during male gametogenesis. To assess the role of F-box protein genes during this crucial developmental step, we selected 34 F-box protein genes recorded as highly and specifically expressed in pollen and isolated corresponding insertion mutants. We checked the expression level of each selected gene by RT-PCR and confirmed pollen expression for 25 genes, but specific expression for only 10 of the 34 F-box protein genes. In addition, we tested the expression level of selected F-box protein genes in 24 mutant lines and showed that 11 of them were null mutants. Transmission analysis of the mutations to the progeny showed that none of the single mutations was gametophytic lethal. These unaffected transmission efficiencies suggested leaky mutations or functional redundancy among F-box protein genes. Cytological observation of the gametophytes in the mutants confirmed these results. Combinations of mutations in F-box protein genes from the same subfamily did not lead to transmission defect either, further highlighting functional redundancy and/or a high proportion of pseudogenes among these F-box protein genes.
authors.affiliation: Institut Jean-Pierre Bourgin, UMR1318 INRA-AgroParisTech, Route de Saint-Cyr (RD 10), 78026, Versailles Cedex, France.
authors.forename: Sobia
authors.initials: S
authors.lastname: Ikram
authors.forename: Monique
authors.initials: M
authors.lastname: Durandet
authors.forename: Simona
authors.initials: S
authors.lastname: Vesa
authors.forename: Serge
authors.initials: S
authors.lastname: Pereira
authors.forename: Philippe
authors.initials: P
authors.lastname: Guerche
authors.forename: Sandrine
authors.initials: S
authors.lastname: Bonhomme
mesh_terms: D017360:Arabidopsis / Q000235:genetics / Q000378:metabolism*; D029681:Arabidopsis Proteins / Q000235:genetics / Q000378:metabolism*; D044783:F-Box Proteins / Q000235:genetics / Q000378:metabolism*; D018506:Gene Expression Regulation, Plant; D005810:Multigene Family; D011058:Pollen / Q000235:genetics / Q000378:metabolism*; D011544:Pseudogenes
chemical_list: D029681:Arabidopsis Proteins; D044783:F-Box Proteins