Investigations of the low frequency modes of ferric cytochrome c using vibrational coherence spectroscopy.
Femtosecond vibrational coherence spectroscopy is used to investigate the low frequency vibrational dynamics of the electron transfer heme protein, cytochrome c (cyt c). The vibrational coherence spectra of ferric cyt c have been measured as a function of excitation wavelength within the Soret band. Vibrational coherence spectra obtained with excitation between 412 and 421 nm display a strong mode at ~44 cm(-1) that has been assigned to have a significant contribution from heme ruffling motion in the electronic ground state. This assignment is based partially on the presence of a large heme ruffling distortion in the normal coordinate structural decomposition (NSD) analysis of the X-ray crystal structures. When the excitation wavelength is moved into the ~421-435 nm region, the transient absorption increases along with the relative intensity of two modes near ~55 and 30 cm(-1). The intensity of the mode near 44 cm(-1) appears to minimize in this region and then recover (but with an opposite phase compared to the blue excitation) when the laser is tuned to 443 nm. These observations are consistent with the superposition of both ground and excited state coherence in the 421-435 nm region due to the excitation of a weak porphyrin-to-iron charge transfer (CT) state, which has a lifetime long enough to observe vibrational coherence. The mode near 55 cm(-1) is suggested to arise from ruffling in a transient CT state that has a less ruffled heme due to its iron d(6) configuration.
Department of Physics and Center for Interdisciplinary Research on Complex Systems, Northeastern University , Boston, Massachusetts 02115, United States.
Venugopal
V
Karunakaran
Yuhan
Y
Sun
Abdelkrim
A
Benabbas
Paul M
PM
Champion
D000818:Animals; D045304:Cytochromes c / Q000737:chemistry*; D006418:Heme / Q000737:chemistry; D006736:Horses; D007477:Ions / Q000737:chemistry; D007501:Iron / Q000737:chemistry; D009038:Motion; D011487:Protein Conformation; D013059:Spectrum Analysis, Raman; D014732:Vibration
D007477:Ions; D006418:Heme; D045304:Cytochromes c; D007501:Iron