title: Bacterial community structure and activity of sulfate reducing bacteria in a membrane aerated biofilm analyzed by microsensor and molecular techniques.
abstract: The activities and vertical spatial distribution of sulfate reducing bacteria (SRB) in an oxygen (O2 )-based membrane aerated biofilm (MAB) were investigated using microsensor (O2 and H2 S) measurements and molecular techniques (polymerase chain reaction-denaturing gradient gel electrophoresis [PCR-DGGE] and fluorescence in situ hybridization [FISH]). The O2 concentration profile revealed that O2 penetrated from the bottom (substratum) of the gas permeable membrane, and was gradually consumed within the biofilm until it was completely depleted near the biofilm/bulk liquid interface, indicating oxic and anoxic zone in the MAB. The H2 S concentration profile showed that H2 S production was found in the upper 285 µm of the biofilm, indicating a high activity of SRB in this region. The results from DGGE of the PCR-amplified dissimilatory sulfite reductase subunit B (dsrB) gene and FISH showed an uneven spatial distribution of SRB. The maximum SRB biomass was located in the upper biofilm. The information from the molecular analysis can be supplemented with that from microsensor measurements to better understand the microbial community and activity of SRB in the MAB.
authors.affiliation: Department of Civil and Environmental Engineering, University of Alberta, Edmonton, Alberta, Canada, T6G 2W2.
authors.forename: Hong
authors.initials: H
authors.lastname: Liu
authors.forename: Shuying
authors.initials: S
authors.lastname: Tan
authors.forename: Zhiya
authors.initials: Z
authors.lastname: Sheng
authors.forename: Yang
authors.initials: Y
authors.lastname: Liu
authors.forename: Tong
authors.initials: T
authors.lastname: Yu
mesh_terms: D000332:Aerobiosis; D001420:Bacteria, Aerobic / Q000145:classification* / Q000302:isolation & purification*; D018441:Biofilms / Q000254:growth & development*; D058448:Biota; D058645:Denaturing Gradient Gel Electrophoresis; D004783:Environmental Microbiology; D006862:Hydrogen Sulfide / Q000032:analysis; D017404:In Situ Hybridization, Fluorescence; D008566:Membranes; D010084:Oxidation-Reduction; D010100:Oxygen / Q000032:analysis; D016133:Polymerase Chain Reaction; D013431:Sulfates / Q000378:metabolism*
chemical_list: D013431:Sulfates; D010100:Oxygen; D006862:Hydrogen Sulfide
keywords: membrane aerated biofilm; microsensor; molecular technique; sulfate reducing bacteria