title: Correcting for optimistic prediction in small data sets.
abstract: The C statistic is a commonly reported measure of screening test performance. Optimistic estimation of the C statistic is a frequent problem because of overfitting of statistical models in small data sets, and methods exist to correct for this issue. However, many studies do not use such methods, and those that do correct for optimism use diverse methods, some of which are known to be biased. We used clinical data sets (United Kingdom Down syndrome screening data from Glasgow (1991-2003), Edinburgh (1999-2003), and Cambridge (1990-2006), as well as Scottish national pregnancy discharge data (2004-2007)) to evaluate different approaches to adjustment for optimism. We found that sample splitting, cross-validation without replication, and leave-1-out cross-validation produced optimism-adjusted estimates of the C statistic that were biased and/or associated with greater absolute error than other available methods. Cross-validation with replication, bootstrapping, and a new method (leave-pair-out cross-validation) all generated unbiased optimism-adjusted estimates of the C statistic and had similar absolute errors in the clinical data set. Larger simulation studies confirmed that all 3 methods performed similarly with 10 or more events per variable, or when the C statistic was 0.9 or greater. However, with lower events per variable or lower C statistics, bootstrapping tended to be optimistic but with lower absolute and mean squared errors than both methods of cross-validation.
authors: Gordon C S
authors: GC
authors: Smith
authors: Shaun R
authors: SR
authors: Seaman
authors: Angela M
authors: AM
authors: Wood
authors: Patrick
authors: P
authors: Royston
authors: Ian R
authors: IR
authors: White
mesh_terms: D003627:Data Interpretation, Statistical; D016208:Databases, Factual; D004314:Down Syndrome; D004812:Epidemiologic Methods; D006801:Humans; D016015:Logistic Models; D015233:Models, Statistical; D015999:Multivariate Analysis; D012372:ROC Curve
keywords: logistic models; models, statistical; multivariate analysis; receiver operating characteristic curve