title: Fluorescence imaging for bacterial cell biology: from localization to dynamics, from ensembles to single molecules.
abstract: Fluorescent proteins and developments in superresolution (nanoscopy) and single-molecule techniques bring high sensitivity, speed, and one order of magnitude gain in spatial resolution to live-cell imaging. These technologies have only recently been applied to prokaryotic cell biology, revealing the exquisite subcellular organization of bacterial cells. Here, we review the parallel evolution of fluorescence microscopy methods and their application to bacteria, mainly drawing examples from visualizing actin-like MreB proteins in the model bacterium Bacillus subtilis. We describe the basic principles of nanoscopy and conventional techniques and their advantages and limitations to help microbiologists choose the most suitable technique for their biological question. Looking ahead, multidimensional live-cell nanoscopy combined with computational image analysis tools, systems biology approaches, and mathematical modeling will provide movie-like, mechanistic, and quantitative description of molecular events in bacterial cells.
authors.affiliation: INRA, UMR1319 Micalis, F-78350 Jouy-en-Josas, France; email: rut.carballido-lopez@jouy.inra.fr.
authors.forename: Zhizhong
authors.initials: Z
authors.lastname: Yao
authors.forename: Rut
authors.initials: R
authors.lastname: Carballido-López
mesh_terms: D001412:Bacillus subtilis / Q000737:chemistry* / Q000235:genetics / Q000378:metabolism; D001426:Bacterial Proteins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism; D008856:Microscopy, Fluorescence / Q000379:methods*; D036103:Nanotechnology
chemical_list: D001426:Bacterial Proteins
keywords: MreB; bacterial cytoskeleton; protein subcellular localization; single molecule; superresolution