title: Recurrent chromosomal aberrations in intravenous leiomyomatosis of the uterus: high-resolution array comparative genomic hybridization study.
abstract: Uterine intravenous leiomyomatosis (IVL) is a distinct smooth muscle neoplasm with a potential of clinical aggressiveness due to its ability to extend into intrauterine and extrauterine vasculature. In this study, chromosomal alterations analyzed by oligonucleotide array comparative genomic hybridization were performed in 9 cases of IVL. The analysis was informative in all cases with multiple copy number losses and/or gains observed in each tumor. The most frequent recurrent loss of 22q12.3-q13.1 was observed in 6 tumors (66.7%), followed by losses of 22q11.23-q13.31, 1p36.13-p33, 2p25.3-p23.3, and 2q24.2-q32.2 and gains of 6p22.2, 2q37.3 and 10q22.2-q22.3, in decreasing order of frequency. Copy number variants were identified at 14q11.2, 15q11.1-q11.2, and 15q26.2. Genes mapping to the regions of loss include CHEK2, EWS, NF2, PDGFB, and MAP3K7IP1 on chromosome 22q, HEI10 on chromosome 14q, and succinate dehydrogenase subunit B, E2F2, ARID1A KPNA6, EIF3S2 , PTCH2, and PIK3R3 on chromosome 1p. Regional losses on chromosomes 22q and 1p and gains on chromosomes 12q showed overlaps with those previously observed in uterine leiomyosarcomas. In addition, presence of multiple chromosomal aberrations implies a higher level of genetic instability. Follow-up polymerase chain reaction (PCR) sequencing analysis of MED12 gene revealed absence of G> A transition at nucleotides c.130 or c.131 in all 9 cases, a frequent mutation found in uterine leiomyoma and its variants. In conclusion, this is the first report of high-resolution, genome-wide investigation of IVL by oligonucleotide array comparative genomic hybridization. The presence of high frequencies of recurrent regional loss involving several chromosomes is an important finding and likely related to the pathogenesis of the disease.
authors.affiliation: Department of Pathology, Yale University, School of Medicine, New Haven, CT 06520-8023.
authors.forename: Natalia
authors.initials: N
authors.lastname: Buza
authors.affiliation: Department of Genetics, Yale University, School of Medicine, New Haven, CT 06520-8023.
authors.forename: Fang
authors.initials: F
authors.lastname: Xu
authors.affiliation: Department of Genetics, Yale University, School of Medicine, New Haven, CT 06520-8023.
authors.forename: Weiqing
authors.initials: W
authors.lastname: Wu
authors.affiliation: Department of Pathology, Yale University, School of Medicine, New Haven, CT 06520-8023.
authors.forename: Ryan J
authors.initials: RJ
authors.lastname: Carr
authors.affiliation: Department of Genetics, Yale University, School of Medicine, New Haven, CT 06520-8023.
authors.forename: Peining
authors.initials: P
authors.lastname: Li
authors.affiliation: Department of Pathology, Yale University, School of Medicine, New Haven, CT 06520-8023.
authors.forename: Pei
authors.initials: P
authors.lastname: Hui
mesh_terms: D000328:Adult; D002869:Chromosome Aberrations; D055028:Comparative Genomic Hybridization / Q000379:methods*; D005260:Female; D018628:Gene Dosage; D006801:Humans; D007889:Leiomyoma / Q000235:genetics* / Q000473:pathology; D018231:Leiomyomatosis / Q000235:genetics* / Q000473:pathology; D007890:Leiomyosarcoma / Q000235:genetics* / Q000473:pathology; D056892:Mediator Complex / Q000235:genetics; D008875:Middle Aged; D014594:Uterine Neoplasms / Q000235:genetics* / Q000473:pathology
chemical_list: C460107:MED12 protein, human; D056892:Mediator Complex
keywords: Array comparative genomic hybridization; Intravenous leiomyomatosis; Leiomyosarcoma; Recurrent chromosomal aberrations; Uterine leiomyoma