title: Deformable part models for object detection in medical images.
abstract: BACKGROUND
  Object detection in 3-D medical images is often necessary for constraining a segmentation or registration task. It may be a task in its own right as well, when instances of a structure, e.g. the lymph nodes, are searched. Problems from occlusion, illumination and projection do not arise, making the problem simpler than object detection in photographies. However, objects of interest are often not well contrasted against the background. Influence from noise and other artifacts is much stronger and shape and appearance may vary substantially within a class.
  
  
  METHODS
  Deformable models capture the characteristic shape of an anatomic object and use constrained deformation for hypothesing object boundaries in image regions of low or non-existing contrast. Learning these constraints requires a large sample data base. We show that training may be replaced by readily available user knowledge defining a prototypical deformable part model. If structures have a strong part-relationship, or if they may be found based on spatially related guiding structures, or if the deformation is rather restricted, the supporting data information suffices for solving the detection task. We use a finite element model to represent anatomic variation by elastic deformation. Complex shape variation may be represented by a hierarchical model with simpler part variation. The hierarchy may be represented explicitly as a hierarchy of sub-shapes, or implicitly by a single integrated model. Data support and model deformation of the complete model can be represented by an energy term, serving as quality-of-fit function for object detection.
  
  
  RESULTS
  The model was applied to detection and segmentation tasks in various medical applications in 2- and 3-D scenes. It has been shown that model fitting and object detection can be carried out efficiently by a combination of a local and global search strategy using models that are parameterized for the different tasks.
  
  
  CONCLUSIONS
  A part-based elastic model represents complex within-class object variation without training. The hierarchy of parts may specify relationship to neighboring anatomical objects in object detection or a part-decomposition of a complex anatomic structure. The intuitive way to incorporate domain knowledge has a high potential to serve as easily adaptable method to a wide range of different detection tasks in medical image analysis.
authors: Klaus
authors: K
authors: Toennies
authors: Marko
authors: M
authors: Rak
authors: Karin
authors: K
authors: Engel
mesh_terms: D001696:Biomechanical Phenomena; D002540:Cerebral Cortex; D003198:Computer Simulation; D003952:Diagnostic Imaging; D004548:Elasticity; D020342:Finite Element Analysis; D006801:Humans; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D008279:Magnetic Resonance Imaging; D013131:Spine; D013378:Substantia Nigra; D017585:Ultrasonography, Doppler, Transcranial