title: Rapid detection, complete genome sequencing, and phylogenetic analysis of porcine deltacoronavirus.
abstract: In February 2014, porcine deltacoronavirus (PDCoV) was identified in the United States. We developed a PDCoV real-time reverse transcription PCR that identified PDCoV in 30% of samples tested. Four additional PDCoV genomes from the United States were sequenced; these had ≈99%-100% nt similarity to the other US PDCoV strains.
authors: Douglas
authors: D
authors: Marthaler
authors: Lindsey
authors: L
authors: Raymond
authors: Yin
authors: Y
authors: Jiang
authors: James
authors: J
authors: Collins
authors: Kurt
authors: K
authors: Rossow
authors: Albert
authors: A
authors: Rovira
mesh_terms: D000818:Animals; D003332:Coronaviridae / Q000145:classification* / Q000235:genetics*; D003333:Coronaviridae Infections / Q000175:diagnosis* / Q000821:virology*; D014644:Genetic Variation; D016679:Genome, Viral; D016366:Open Reading Frames; D010802:Phylogeny; D013552:Swine
keywords: Porcine deltacoronavirus; United States; phylogenetic analysis; rRT-PCR; viruses