title: Complete mitochondrial genome of Sebastes vulpes (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea.
abstract: Sebastes vulpes is considered a valid species despite the presence of extensive hybrids. To obtain the basic genetic intraspecific structure, we analyzed the complete mitogenome of S. vulpes using next-generation sequencing. The complete mitogenome was 16,462 bp in length containing 13 protein-coding genes (PCGs), 2 rRNAs, 22 tRNAs and 1 control region. The complete mitogenome comprised 27.7% A, 26.5% T, 17.1% G and 28.6% C, showing a minor AT bias (54.3%). The initial codon in all PCGs was ATG, excluding COX1 (GTG). The majority of stop codons in the PCGs were TAA, excluding ND1 and ND3 (TAG), ND4 (AGA) and Cytb (incomplete termination codon, T). All tRNAs had a typical cloverleaf structure, excluding tRNA(Ser (AGY)), which lacked the DHU arm. The complete mitogenome of S. vulpes can be used to study hybridisation and on-going speciation.
authors.affiliation: a East Sea Environment Research Division , Korea Institute of Ocean Science & Technology , Hujung-ri, Jukbyeon-myun, Uljin-gun , Gyeongbuk , Republic of Korea .|b Department of Convergence Study on the Ocean Science and Technology , Ocean Science and Technology School, Korea Maritime and Ocean University , Dongsamg-dong, Yeongdo-gu , Busan , Republic of Korea .|c Department of Marine Biotechnology , Korea University of Science & Technology , Daejeon , Republic of Korea .
authors.forename: Yo-Soon
authors.initials: YS
authors.lastname: Jang
authors.affiliation: d Tong-Yeong Marine Living Resources Research & Conservation Center, Korea Institute of Ocean Science & Technology , Sangrok-gu , Ansan , Republic of Korea .
authors.forename: Sung-Yong
authors.initials: SY
authors.lastname: Oh
authors.affiliation: e Marine Ecosystem Research Division , Korea Institute of Ocean Science & Technology , Sangrok-gu , Ansan , Republic of Korea .
authors.forename: Eun Kyung
authors.initials: EK
authors.lastname: Lee
authors.affiliation: d Tong-Yeong Marine Living Resources Research & Conservation Center, Korea Institute of Ocean Science & Technology , Sangrok-gu , Ansan , Republic of Korea .
authors.forename: Jung-Goo
authors.initials: JG
authors.lastname: Myoung
authors.affiliation: f Fisheries Resources and Environment Division , East Sea Fisheries Research Institute , Yeongok-myeon, Gangneung , Gangwon-do , Republic of Korea .
authors.forename: Jeong-Ho
authors.initials: JH
authors.lastname: Park
authors.affiliation: g National Institute of Animal Science, Rural Development Administration , Eoryong-Ri, Seonghwan-Eup, Cheonan-Si , Chungnam , Korea , and.
authors.forename: Ki-Yong
authors.initials: KY
authors.lastname: Kim
authors.affiliation: e Marine Ecosystem Research Division , Korea Institute of Ocean Science & Technology , Sangrok-gu , Ansan , Republic of Korea .|h Department of Marine Biology , Korea University of Science & Technology , Daejeon , Republic of Korea.
authors.forename: Sung
authors.initials: S
authors.lastname: Kim
mesh_terms: D000818:Animals; D001482:Base Composition / Q000235:genetics; D001483:Base Sequence; D018387:Codon, Initiator / Q000235:genetics; D018388:Codon, Terminator / Q000235:genetics; D004272:DNA, Mitochondrial / Q000235:genetics*; D059646:Genome Size / Q000235:genetics; D054629:Genome, Mitochondrial / Q000235:genetics*; D008928:Mitochondria / Q000235:genetics*; D010473:Perciformes / Q000235:genetics*; D016133:Polymerase Chain Reaction / Q000662:veterinary; D012335:RNA, Ribosomal / Q000235:genetics; D012343:RNA, Transfer / Q000235:genetics; D056910:Republic of Korea; D017422:Sequence Analysis, DNA / Q000662:veterinary*
chemical_list: D018387:Codon, Initiator; D018388:Codon, Terminator; D004272:DNA, Mitochondrial; D012335:RNA, Ribosomal; D012343:RNA, Transfer
keywords: Mitochondrial genome; Sebastes vulpes; Sebastinae; rockfish