title: Avian bornaviruses: diagnosis, isolation, and genotyping.
abstract: These protocols apply to all currently known genotypes of avian bornavirus (ABV). First, they include four basic protocols for molecular techniques that should enable an investigator to detect ABV infection in a live or dead bird. These include both reverse transcriptase and real-time PCR assays. Second, they include three protocols enabling ABV infections to be diagnosed by serologic techniques including indirect immunofluorescence assays, western blotting, and enzyme-linked immunoassays. Third, they also include methods by which ABV can be isolated from infected bird tissues by culture in primary duck embryo fibroblasts, as well as in other avian cell lines. Finally, as part of a diagnostic workup, any virus detected should be genotyped by sequencing, and a protocol for this is also provided.
authors.affiliation: Department of Veterinary Pathobiology, Texas A&M University, College Station, Texas.
authors.forename: Jianhua
authors.initials: J
authors.lastname: Guo
authors.forename: Susan
authors.initials: S
authors.lastname: Payne
authors.forename: Shuping
authors.initials: S
authors.lastname: Zhang
authors.forename: Debra
authors.initials: D
authors.lastname: Turner
authors.forename: Ian
authors.initials: I
authors.lastname: Tizard
authors.forename: Paulette
authors.initials: P
authors.lastname: Suchodolski
mesh_terms: D000818:Animals; D001715:Bird Diseases / Q000821:virology*; D001717:Birds; D015153:Blotting, Western; D028981:Bornaviridae / Q000145:classification / Q000235:genetics / Q000302:isolation & purification*; D004587:Electrophoresis, Agar Gel / Q000379:methods; D004797:Enzyme-Linked Immunosorbent Assay / Q000379:methods; D005838:Genotype; D018701:Mononegavirales Infections / Q000175:diagnosis / Q000662:veterinary* / Q000821:virology; D016133:Polymerase Chain Reaction; D012367:RNA, Viral / Q000302:isolation & purification; D060888:Real-Time Polymerase Chain Reaction / Q000379:methods; D020133:Reverse Transcriptase Polymerase Chain Reaction / Q000379:methods; D014776:Virus Cultivation / Q000379:methods
chemical_list: D012367:RNA, Viral
keywords: avian bornaviruses; genotyping; immunofluorescence; immunohistochemistry; polymerase chain reaction; virus culture; western blotting