title: Chemical methods for decoding cytosine modifications in DNA.
authors.affiliation: †Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW United Kingdom.
authors.forename: Michael J
authors.initials: MJ
authors.lastname: Booth
authors.affiliation: †Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW United Kingdom.
authors.forename: Eun-Ang
authors.initials: EA
authors.lastname: Raiber
authors.affiliation: †Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW United Kingdom.|‡Cambridge Institute, Li Ka Shing Centre, Cancer Research U.K., Robinson Way, Cambridge, CB2 0RE United Kingdom.|§School of Clinical Medicine, The University of Cambridge, Addenbrooke's Hospital, Hills Road, Cambridge, CB2 0SP United Kingdom.
authors.forename: Shankar
authors.initials: S
authors.lastname: Balasubramanian
mesh_terms: D000818:Animals; D003596:Cytosine / Q000737:chemistry* / Q000378:metabolism; D004247:DNA / Q000737:chemistry* / Q000378:metabolism; D006801:Humans
chemical_list: D003596:Cytosine; D004247:DNA
references.citation: J Am Chem Soc. 1969 Dec 17;91(26):7490-505
references.pmid: 5358618
references.citation: J Am Chem Soc. 2013 Jun 26;135(25):9315-7
references.pmid: 23758547
references.citation: Angew Chem Int Ed Engl. 2013 Apr 15;52(16):4350-5
references.pmid: 23559386
references.citation: Nat Biotechnol. 2012 Mar 25;30(4):349-53
references.pmid: 22446694
references.citation: Nature. 1953 Apr 25;171(4356):737-8
references.pmid: 13054692
references.citation: J Biol Chem. 2011 Oct 14;286(41):35334-35338
references.pmid: 21862836
references.citation: Nat Nanotechnol. 2011 Sep 18;6(10):615-24
references.pmid: 21926981
references.citation: Talanta. 2013 Dec 15;117:445-8
references.pmid: 24209366
references.citation: Nat Chem. 2014 May;6(5):435-40
references.pmid: 24755596
references.citation: Bioorg Med Chem Lett. 2011 Sep 1;21(17):5075-7
references.pmid: 21524909
references.citation: FEBS Lett. 1978 Jul 15;91(2):213-5
references.pmid: 680125
references.citation: Biochem J. 1972 Feb;126(4):781-90
references.pmid: 4538516
references.citation: Proc Natl Acad Sci U S A. 2011 Jul 5;108(27):11040-5
references.pmid: 21690366
references.citation: Nature. 2007 Dec 6;450(7171):908-12
references.pmid: 17994007
references.citation: Nat Rev Genet. 2011 Nov 15;13(1):7-13
references.pmid: 22083101
references.citation: Mol Cell. 2011 May 20;42(4):451-64
references.pmid: 21514197
references.citation: Science. 2009 May 15;324(5929):929-30
references.pmid: 19372393
references.citation: Nature. 2011 May 19;473(7347):394-7
references.pmid: 21552279
references.citation: Nat Protoc. 2012 Dec;7(12):2159-70
references.pmid: 23196972
references.citation: Genome Biol. 2012 Aug 17;13(8):R69
references.pmid: 22902005
references.citation: Chem Res Toxicol. 1996 Jun;9(4):745-50
references.pmid: 8831819
references.citation: Genes Dev. 2011 Apr 1;25(7):679-84
references.pmid: 21460036
references.citation: Nucleic Acids Res. 2011 Jul;39(12):5149-56
references.pmid: 21378122
references.citation: Cell. 2013 Apr 25;153(3):692-706
references.pmid: 23602152
references.citation: Science. 2011 Sep 2;333(6047):1303-7
references.pmid: 21817016
references.citation: Angew Chem Int Ed Engl. 2011 Jul 25;50(31):7008-12
references.pmid: 21721093
references.citation: Nat Genet. 2005 Aug;37(8):853-62
references.pmid: 16007088
references.citation: Biochemistry. 1970 Jul 7;9(14):2858-65
references.pmid: 5459538
references.citation: Methods. 2009 Mar;47(3):142-50
references.pmid: 18950712
references.citation: Genome Res. 2010 Mar;20(3):320-31
references.pmid: 20133333
references.citation: J Virol. 1978 Feb;25(2):500-9
references.pmid: 146749
references.citation: Genome Res. 2012 Jun;22(6):1128-38
references.pmid: 22466170
references.citation: Cell. 2012 Jun 8;149(6):1368-80
references.pmid: 22608086
references.citation: Genes Dev. 2011 May 15;25(10):1010-22
references.pmid: 21576262
references.citation: BMC Biol. 2013 Jan 22;11:4
references.pmid: 23339471
references.citation: Proc Natl Acad Sci U S A. 1992 Mar 1;89(5):1827-31
references.pmid: 1542678
references.citation: Nature. 2008 Aug 7;454(7205):766-70
references.pmid: 18600261
references.citation: Cell. 2008 May 2;133(3):523-36
references.pmid: 18423832
references.citation: FEBS Lett. 2009 Jun 5;583(11):1713-20
references.pmid: 19376112
references.citation: Trends Genet. 2009 Feb;25(2):82-90
references.pmid: 19144439
references.citation: Chem Commun (Camb). 2011 Jul 14;47(26):7281-6
references.pmid: 21544287
references.citation: Genome Res. 2011 Oct;21(10):1592-600
references.pmid: 21862626
references.citation: Angew Chem Int Ed Engl. 2011 Dec 23;50(52):12406-10
references.pmid: 22144295
references.citation: Biochemistry. 2012 Feb 7;51(5):1009-19
references.pmid: 22229759
references.citation: J Am Chem Soc. 2013 Jan 30;135(4):1240-3
references.pmid: 23301810
references.citation: Cell. 1999 Oct 29;99(3):247-57
references.pmid: 10555141
references.citation: Nucleic Acids Res. 2011 Apr;39(8):e55
references.pmid: 21300643
references.citation: Proc Jpn Acad Ser B Phys Biol Sci. 2008;84(8):321-30
references.pmid: 18941305
references.citation: J Am Chem Soc. 1974 Feb 6;96(3):906-12
references.pmid: 4814744
references.citation: Nucleic Acids Res. 2011 Nov;39(21):9294-305
references.pmid: 21813453
references.citation: Science. 2007 Feb 23;315(5815):1141-3
references.pmid: 17322062
references.citation: Cell. 2013 Apr 25;153(3):678-91
references.pmid: 23602153
references.citation: Genome Res. 2009 Jun;19(6):959-66
references.pmid: 19273618
references.citation: Science. 2009 May 15;324(5929):930-5
references.pmid: 19372391
references.citation: Proc Natl Acad Sci U S A. 2011 Aug 30;108(35):14497-502
references.pmid: 21844352
references.citation: Chem Commun (Camb). 2013 Nov 4;49(85):9968-70
references.pmid: 24042448
references.citation: J Mol Evol. 1976 May 26;7(4):325-9
references.pmid: 933178
references.citation: Genome Res. 2012 Jun;22(6):1120-7
references.pmid: 22466171
references.citation: Science. 2012 May 18;336(6083):934-7
references.pmid: 22539555
references.citation: J Mol Biol. 1964 Aug;9:525-36
references.pmid: 14202283
references.citation: Nucleic Acids Res. 2010 Nov;38(21):e192
references.pmid: 20813757
references.citation: Angew Chem Int Ed Engl. 2012 Jun 25;51(26):6516-20
references.pmid: 22644704
references.citation: Nat Biotechnol. 2011 Jan;29(1):68-72
references.pmid: 21151123
references.citation: Proc Natl Acad Sci U S A. 1977 Feb;74(2):560-4
references.pmid: 265521
references.citation: Nucleic Acids Res. 1978 May;5(5):1479-85
references.pmid: 351561
references.citation: Cell Rep. 2013 Feb 21;3(2):567-76
references.pmid: 23352666
references.citation: Nature. 2008 Nov 6;456(7218):53-9
references.pmid: 18987734
references.citation: Nat Chem Biol. 2012 Feb 12;8(4):328-30
references.pmid: 22327402
references.citation: Nature. 1950 Aug 5;166(4214):237-8
references.pmid: 15439258
references.citation: Nucleic Acids Res. 2013 Jul;41(13):6421-9
references.pmid: 23658232
references.citation: Biochem J. 1976 Jun 1;155(3):709-12
references.pmid: 949331
references.citation: Nat Protoc. 2013 Oct;8(10):1841-51
references.pmid: 24008380
references.citation: Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7
references.pmid: 271968
references.citation: EMBO Rep. 2009 Nov;10(11):1259-64
references.pmid: 19798101
references.citation: Nat Methods. 2011 Nov 20;9(1):75-7
references.pmid: 22101853
references.citation: Chem Commun (Camb). 2010 Nov 21;46(43):8195-7
references.pmid: 20927439
references.citation: Nucleic Acids Res. 2012 Nov 1;40(20):10203-14
references.pmid: 22962365
references.citation: Epigenetics. 2013 Apr;8(4):421-30
references.pmid: 23502161
references.citation: Proc Natl Acad Sci U S A. 2013 Nov 19;110(47):18910-5
references.pmid: 24167260
references.citation: J Biol Chem. 1961 May;236:1487-93
references.pmid: 13753193
references.citation: Nature. 2010 Jul 15;466(7304):388-92
references.pmid: 20512117
references.citation: Proc Natl Acad Sci U S A. 2013 Nov 19;110(47):18904-9
references.pmid: 24167255
references.citation: Nat Methods. 2010 Jun;7(6):461-5
references.pmid: 20453866
references.citation: Nat Struct Mol Biol. 2012 Oct;19(10):1037-43
references.pmid: 22961382
references.citation: J Biol Chem. 2011 Jul 15;286(28):24685-93
references.pmid: 21610077
references.citation: Nat Rev Genet. 2012 May 29;13(7):484-92
references.pmid: 22641018
references.citation: Genome Res. 2006 Aug;16(8):1046-55
references.pmid: 16809668
references.citation: Nucleic Acids Res. 2001 Sep 15;29(18):3705-27
references.pmid: 11557805
references.citation: Science. 2007 Sep 21;317(5845):1760-4
references.pmid: 17673620
references.citation: Science. 2011 Sep 2;333(6047):1300-3
references.pmid: 21778364
references.citation: Nucleic Acids Res. 1978 Sep;5(9):3231-6
references.pmid: 704354
references.citation: Nature. 2010 Jul 8;466(7303):253-7
references.pmid: 20613842
references.citation: Annu Rev Microbiol. 1980;34:137-58
references.pmid: 7002022
references.citation: Nature. 2011 May 19;473(7347):398-402
references.pmid: 21460836
references.citation: Angew Chem Int Ed Engl. 2011 Feb 25;50(9):2090-3
references.pmid: 21344558
references.citation: Nature. 2011 May 19;473(7347):343-8
references.pmid: 21490601
references.citation: Genome Res. 2009 Jun;19(6):1044-56
references.pmid: 19273619
references.citation: PLoS One. 2010 Jan 26;5(1):e8888
references.pmid: 20126651
references.citation: Genes Dev. 2002 Jan 1;16(1):6-21
references.pmid: 11782440
references.citation: J Biol Chem. 1973 Jun 10;248(11):4060-4
references.pmid: 4736082
references.citation: Nucleic Acids Res. 1980 Oct 24;8(20):4777-90
references.pmid: 7443525
references.citation: Science. 2009 Jan 2;323(5910):133-8
references.pmid: 19023044
references.citation: J Biol Chem. 2004 Jun 25;279(26):27816-23
references.pmid: 15105426
references.citation: Bioorg Med Chem Lett. 2007 Apr 1;17(7):1912-5
references.pmid: 17276678
references.citation: Genome Res. 2013 Dec;23(12):2126-35
references.pmid: 24179143