title: Automated segmentation of breast in 3-D MR images using a robust atlas.
abstract: This paper presents a robust atlas-based segmentation (ABS) algorithm for segmentation of the breast boundary in 3-D MR images. The proposed algorithm combines the well-known methodologies of ABS namely probabilistic atlas and atlas selection approaches into a single framework where two configurations are realized. The algorithm uses phase congruency maps to create an atlas which is robust to intensity variations. This allows an atlas derived from images acquired with one MR imaging sequence to be used to segment images acquired with a different MR imaging sequence and eliminates the need for intensity-based registration. Images acquired using a Dixon sequence were used to create an atlas which was used to segment both Dixon images (intra-sequence) and T1-weighted images (inter-sequence). In both cases, highly accurate results were achieved with the median Dice similarity coefficient values of 94% ±4% and 87 ±6.5%, respectively.
authors.forename: Farzad
authors.initials: F
authors.lastname: Khalvati
authors.forename: Cristina
authors.initials: C
authors.lastname: Gallego-Ortiz
authors.forename: Sharmila
authors.initials: S
authors.lastname: Balasingham
authors.forename: Anne L
authors.initials: AL
authors.lastname: Martel
mesh_terms: D000293:Adolescent; D000328:Adult; D000465:Algorithms; D001940:Breast / Q000033:anatomy & histology*; D005260:Female; D006801:Humans; D021621:Imaging, Three-Dimensional / Q000379:methods*; D008279:Magnetic Resonance Imaging / Q000379:methods*; D008875:Middle Aged; D015233:Models, Statistical; D055815:Young Adult