title: Bacterial community characterization in the soils of native and restored rainforest fragments.
abstract: The Brazilian Atlantic Forest ("Mata Atlântica") has been largely studied due to its valuable and unique biodiversity. Unfortunately, this priceless ecosystem has been widely deforested and only 10 % of its original area is still untouched. Some projects have been successfully implemented to restore its fauna and flora but there is a lack of information on how the soil bacterial communities respond to this process. Thus, our aim was to evaluate the influence of soil attributes and seasonality on soil bacterial communities of rainforest fragments under restoration processes. Soil samples from a native site and two ongoing restoration fragments with different times of implementation (10 and 20 years) were collected and assayed by using culture-independent approaches. Our findings demonstrate that seasonality barely altered the bacterial distribution whereas soil chemical attributes and plant species were related to bacterial community structure during the restoration process. Moreover, the strict relationship observed for two bacterial groups, Solibacteriaceae and Verrucomicrobia, increasing from the more recently planted (10 years) to the native site, with the 20 year old restoration site in the middle, which may suggest their use as bioindicators of soil quality and recovery of forest fragments being restored.
authors.affiliation: Environmental Microbiology Lab., EMBRAPA, Rod SP 340-Km 127, 5, Caixa Postal 69, Jaguariúna, 13820-000, Brazil, rafaellfvas@gmail.com.
authors.forename: Rafael L F
authors.initials: RL
authors.lastname: Vasconcellos
authors.forename: Tiago D
authors.initials: TD
authors.lastname: Zucchi
authors.forename: Rodrigo G
authors.initials: RG
authors.lastname: Taketani
authors.forename: Fernando D
authors.initials: FD
authors.lastname: Andreote
authors.forename: Elke J B N
authors.initials: EJ
authors.lastname: Cardoso
mesh_terms: D001419:Bacteria / Q000145:classification / Q000235:genetics; D058448:Biota; D001938:Brazil; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D058645:Denaturing Gradient Gel Electrophoresis; D006801:Humans; D063245:Plant Development; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D065947:Rainforest; D012621:Seasons; D017422:Sequence Analysis, DNA; D012987:Soil / Q000737:chemistry; D012988:Soil Microbiology
chemical_list: D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D012336:RNA, Ribosomal, 16S; D012987:Soil