title: Phylogenetic analysis of the Listeria monocytogenes based on sequencing of 16S rRNA and hlyA genes.
abstract: The discrimination between Listeria monocytogenes and Listeria species has been detected. The 16S rRNA and hlyA were PCR amplified with set of oligonucleotide primers with flank 1,500 and 456 bp fragments, respectively. Based on the differences in 16S rRNA and hlyA genes, a total 80 isolates from different environmental, food and clinical samples confirmed it to be L. monocytogenes. The 16S rRNA sequence similarity suggested that the isolates were similar to the previously reported ones from different habitats by others. The phylogenetic interrelationships of the genus Listeria were investigated by sequencing of 16S rRNA and hlyA gene. The 16S rRNA sequence indicated that genus Listeria is comprised of following closely related but distinct lines of descent, one is the L. monocytogenes species group (including L. innocua, L. ivanovii, L. seeligeri and L. welshimeri) and other, the species L. grayi, L. rocourtiae and L. fleischmannii. The phylogenetic tree based on hlyA gene sequence clearly differentiates between the L. monocytogenes, L. ivanovii and L. seeligeri. In the present study, we identified 80 isolates of L. monocytogenes originating from different clinical, food and environmental samples based on 16S rRNA and hlyA gene sequence similarity.
authors.affiliation: Environmental Microbiology Lab, Department of Botany, Banaras Hindu University, Varanasi, 221005, India.
authors.forename: Dharmendra Kumar
authors.initials: DK
authors.lastname: Soni
authors.forename: Suresh Kumar
authors.initials: SK
authors.lastname: Dubey
mesh_terms: D000818:Animals; D001427:Bacterial Toxins / Q000032:analysis*; D003611:Dairy Products / Q000382:microbiology; D019143:Evolution, Molecular; D005516:Food Microbiology; D006360:Heat-Shock Proteins / Q000032:analysis*; D006460:Hemolysin Proteins / Q000032:analysis*; D006801:Humans; D008089:Listeria monocytogenes / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification*; D008088:Listeriosis / Q000382:microbiology; D008892:Milk / Q000382:microbiology; D008969:Molecular Sequence Data; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000032:analysis*; D017423:Sequence Analysis, RNA / Q000379:methods*; D012988:Soil Microbiology; D014871:Water Microbiology
chemical_list: D001427:Bacterial Toxins; D006360:Heat-Shock Proteins; D006460:Hemolysin Proteins; D012336:RNA, Ribosomal, 16S; C038705:hlyA protein, Listeria monocytogenes