title: Guava leaf extract inhibits quorum-sensing and Chromobacterium violaceum induced lysis of human hepatoma cells: whole transcriptome analysis reveals differential gene expression.
abstract: Quorum sensing (QS) is a process mediated via small molecules termed autoinducers (AI) that allow bacteria to respond and adjust according to the cell population density by altering the expression of multitudinous genes. Since QS governs numerous bioprocesses in bacteria, including virulence, its inhibition promises to be an ideal target for the development of novel therapeutics. We found that the aqueous leaf extract of Psidium guajava (GLE) exhibited anti-QS properties as evidenced by inhibition of violacein production in Chromobacterium violaceum and swarming motility of Pseudomonas aeruginosa. The gram-negative bacterium, C. violaceum is a rare pathogen with high mortality rate. In this study, perhaps for the first time, we identified the target genes of GLE in C. violaceum MTCC 2656 by whole transcriptome analysis on Ion Torrent. Our data revealed that GLE significantly down-regulated 816 genes at least three fold, with p value ≤ 0.01, which comprises 19% of the C. violaceum MTCC 2656 genome. These genes were distributed throughout the genome and were associated with virulence, motility and other cellular processes, many of which have been described as quorum regulated in C. violaceum and other gram negative bacteria. Interestingly, GLE did not affect the growth of the bacteria. However, consistent with the gene expression pattern, GLE treated C. violaceum cells were restrained from causing lysis of human hepatoma cell line, HepG2, indicating a positive relationship between the QS-regulated genes and pathogenicity. Overall, our study proposes GLE as a QS inhibitor (QSI) with the ability to attenuate virulence without affecting growth. To the best of our knowledge, this is the first report which provides with a plausible set of candidate genes regulated by the QS system in the neglected pathogen C. violaceum.
authors.affiliation: OMICS Laboratory, Department of Biotechnology, University of North Bengal, Siliguri, West Bengal, India.
authors.forename: Runu
authors.initials: R
authors.lastname: Ghosh
authors.affiliation: OMICS Laboratory, Department of Biotechnology, University of North Bengal, Siliguri, West Bengal, India.
authors.forename: Bipransh Kumar
authors.initials: BK
authors.lastname: Tiwary
authors.affiliation: OMICS Laboratory, Department of Biotechnology, University of North Bengal, Siliguri, West Bengal, India.
authors.forename: Anoop
authors.initials: A
authors.lastname: Kumar
authors.affiliation: OMICS Laboratory, Department of Biotechnology, University of North Bengal, Siliguri, West Bengal, India.
authors.forename: Ranadhir
authors.initials: R
authors.lastname: Chakraborty
mesh_terms: D006528:Carcinoma, Hepatocellular / Q000473:pathology; D016923:Cell Death / Q000187:drug effects; D002861:Chromobacterium / Q000166:cytology* / Q000187:drug effects / Q000235:genetics* / Q000502:physiology; D015536:Down-Regulation / Q000187:drug effects; D020869:Gene Expression Profiling; D053263:Gene Regulatory Networks / Q000187:drug effects; D016680:Genome, Bacterial / Q000235:genetics; D056945:Hep G2 Cells; D006801:Humans; D007211:Indoles / Q000378:metabolism; D008113:Liver Neoplasms / Q000473:pathology; D010641:Phenotype; D010936:Plant Extracts / Q000494:pharmacology*; D018515:Plant Leaves / Q000737:chemistry*; D031647:Psidium / Q000737:chemistry*; D053038:Quorum Sensing / Q000187:drug effects* / Q000235:genetics; D013997:Time Factors; D037521:Virulence Factors / Q000235:genetics; D014867:Water / Q000737:chemistry
chemical_list: D007211:Indoles; D010936:Plant Extracts; D037521:Virulence Factors; D014867:Water; C063155:violacein