title: Structure of the cyclic peptide [W8S]contryphan Vn: effect of the tryptophan/serine substitution on trans-cis proline isomerization.
abstract: The structural characterization of [W8S]contryphan Vn, an analogue of Contryphan Vn with tryptophan 8 substituted with a serine residue (W8S), was performed by NMR spectroscopy, molecular dynamics simulations and fluorescence spectroscopy. Contryphan Vn, a bioactive cyclic peptide from the venom of the cone snail Conus ventricosus, contains an S-S bridge between two cysteines and a D-tryptophan. Like other Contryphans, [W8S]contryphan Vn has proline 7 isomerized trans, while the proline 4 has nearly equivalent populations of cis and trans configurations. The thermodynamic and kinetic parameters of the trans-cis isomerization of proline 4 were measured. The isomers of [W8S]contryphan Vn with proline 4 in cis and trans show structural differences. The absence of the salt bridge between the same Asp2 and Lys6, present in Contryphan Vn, may be attributed to the lack of the hydrophobic side chain of Trp8 where it likely protects the electrostatic interactions. These results may contribute to identifying, in these cyclic peptides, the structural determinants of the mechanism of proline trans-cis isomerization, this being also an important step in protein folding.
authors.affiliation: Department of Chemical Sciences and Technologies, University of Rome "Tor Vergata", Via della Ricerca Scientifica 1, 00133, Rome, Italy.
authors.forename: Ridvan
authors.initials: R
authors.lastname: Nepravishta
authors.forename: Walter
authors.initials: W
authors.lastname: Mandaliti
authors.forename: Sonia
authors.initials: S
authors.lastname: Melino
authors.forename: Tommaso
authors.initials: T
authors.lastname: Eliseo
authors.forename: Maurizio
authors.initials: M
authors.lastname: Paci
mesh_terms: D000595:Amino Acid Sequence; D007536:Isomerism; D008958:Models, Molecular; D008969:Molecular Sequence Data; D010456:Peptides, Cyclic / Q000138:chemical synthesis / Q000737:chemistry*; D011392:Proline / Q000737:chemistry*; D012694:Serine / Q000737:chemistry*; D014364:Tryptophan / Q000737:chemistry*
chemical_list: D010456:Peptides, Cyclic; C102355:contryphan; D012694:Serine; D014364:Tryptophan; D011392:Proline