title: Hsp90 promotes kinase evolution.
abstract: Heat-shock protein 90 (Hsp90) promotes the maturation and stability of its client proteins, including many kinases. In doing so, Hsp90 may allow its clients to accumulate mutations as previously proposed by the capacitor hypothesis. If true, Hsp90 clients should show increased evolutionary rate compared with nonclients; however, other factors, such as gene expression and protein connectivity, may confound or obscure the chaperone's putative contribution. Here, we compared the evolutionary rates of many Hsp90 clients and nonclients in the human protein kinase superfamily. We show that Hsp90 client status promotes evolutionary rate independently of, but in a small magnitude similar to that of gene expression and protein connectivity. Hsp90's effect on kinase evolutionary rate was detected across mammals, specifically relaxing purifying selection. Hsp90 clients also showed increased nucleotide diversity and harbored more damaging variation than nonclient kinases across humans. These results are consistent with the central argument of the capacitor hypothesis that interaction with the chaperone allows its clients to harbor genetic variation. Hsp90 client status is thought to be highly dynamic with as few as one amino acid change rendering a protein dependent on the chaperone. Contrary to this expectation, we found that across protein kinase phylogeny Hsp90 client status tends to be gained, maintained, and shared among closely related kinases. We also infer that the ancestral protein kinase was not an Hsp90 client. Taken together, our results suggest that Hsp90 played an important role in shaping the kinase superfamily.
authors.affiliation: Molecular and Cellular Biology Program, University of Washington Department of Genome Sciences, University of Washington.
authors.forename: Jennifer
authors.initials: J
authors.lastname: Lachowiec
authors.affiliation: Department of Genome Sciences, University of Washington.
authors.forename: Tzitziki
authors.initials: T
authors.lastname: Lemus
authors.affiliation: Department of Genome Sciences, University of Washington Santa Fe Institute, Santa Fe queitsch@uw.edu elbo@uw.edu.
authors.forename: Elhanan
authors.initials: E
authors.lastname: Borenstein
authors.affiliation: Department of Genome Sciences, University of Washington queitsch@uw.edu elbo@uw.edu.
authors.forename: Christine
authors.initials: C
authors.lastname: Queitsch
mesh_terms: D000818:Animals; D019143:Evolution, Molecular; D018841:HSP90 Heat-Shock Proteins / Q000378:metabolism*; D006801:Humans; D008322:Mammals / Q000235:genetics / Q000378:metabolism*; D018832:Molecular Chaperones / Q000378:metabolism; D059645:Mutation Rate; D010802:Phylogeny; D011494:Protein Kinases / Q000235:genetics* / Q000378:metabolism*; D012641:Selection, Genetic
chemical_list: D018841:HSP90 Heat-Shock Proteins; D018832:Molecular Chaperones; D011494:Protein Kinases
keywords: Hsp90; capacitor; evolution; gene family; kinase; relaxed selection