title: Genome-wide screening of Saccharomyces cerevisiae genes required to foster tolerance towards industrial wheat straw hydrolysates.
abstract: The presence of toxic compounds derived from biomass pre-treatment in fermentation media represents an important drawback in second-generation bio-ethanol production technology and overcoming this inhibitory effect is one of the fundamental challenges to its industrial production. The aim of this study was to systematically identify, in industrial medium and at a genomic scale, the Saccharomyces cerevisiae genes required for simultaneous and maximal tolerance to key inhibitors of lignocellulosic fermentations. Based on the screening of EUROSCARF haploid mutant collection, 242 and 216 determinants of tolerance to inhibitory compounds present in industrial wheat straw hydrolysate (WSH) and in inhibitor-supplemented synthetic hydrolysate were identified, respectively. Genes associated to vitamin metabolism, mitochondrial and peroxisomal functions, ribosome biogenesis and microtubule biogenesis and dynamics are among the newly found determinants of WSH resistance. Moreover, PRS3, VMA8, ERG2, RAV1 and RPB4 were confirmed as key genes on yeast tolerance and fermentation of industrial WSH.
authors.affiliation: CEB-Centre of Biological Engineering, Universidade do Minho, Campus de Gualtar, 4710-057, Braga, Portugal, franciscopereira@deb.uminho.pt.
authors.forename: Francisco B
authors.initials: FB
authors.lastname: Pereira
authors.forename: Miguel C
authors.initials: MC
authors.lastname: Teixeira
authors.forename: Nuno P
authors.initials: NP
authors.lastname: Mira
authors.forename: Isabel
authors.initials: I
authors.lastname: Sá-Correia
authors.forename: Lucília
authors.initials: L
authors.lastname: Domingues
mesh_terms: D019342:Acetic Acid / Q000633:toxicity; D018533:Biomass; D025141:Drug Resistance, Fungal; D005285:Fermentation; D005662:Furaldehyde / Q000633:toxicity; D005800:Genes, Fungal; D016681:Genome, Fungal; D007218:Industrial Microbiology; D008031:Lignin / Q000378:metabolism*; D012441:Saccharomyces cerevisiae / Q000187:drug effects / Q000235:genetics* / Q000378:metabolism; D013312:Stress, Physiological / Q000235:genetics; D014908:Triticum
chemical_list: C036909:lignocellulose; D008031:Lignin; D005662:Furaldehyde; D019342:Acetic Acid