title: Molecular identification and quantification of tetracycline and erythromycin resistance genes in Spanish and Italian retail cheeses.
abstract: Large antibiotic resistance gene pools in the microbiota of foods may ultimately pose a risk for human health. This study reports the identification and quantification of tetracycline- and erythromycin-resistant populations, resistance genes, and gene diversity in traditional Spanish and Italian cheeses, via culturing, conventional PCR, real-time quantitative PCR (qPCR), and denaturing gradient gel electrophoresis (DGGE). The numbers of resistant bacteria varied widely among the antibiotics and the different cheese varieties; in some cheeses, all the bacterial populations seemed to be resistant. Up to eight antibiotic resistance genes were sought by gene-specific PCR, six with respect to tetracycline, that is, tet(K), tet(L), tet(M), tet(O), tet(S), and tet(W), and two with respect to erythromycin, that is, erm(B) and erm(F). The most common resistance genes in the analysed cheeses were tet(S), tet(W), tet(M), and erm(B). The copy numbers of these genes, as quantified by qPCR, ranged widely between cheeses (from 4.94 to 10.18log10/g). DGGE analysis revealed distinct banding profiles and two polymorphic nucleotide positions for tet(W)-carrying cheeses, though the similarity of the sequences suggests this tet(W) to have a monophyletic origin. Traditional cheeses would therefore appear to act as reservoirs for large numbers of many types of antibiotic resistance determinants.
authors.affiliation: Departamento de Microbiología y Bioquímica, Instituto de Productos Lácteos de Asturias (IPLA-CSIC), Paseo Río Linares s/n, Villaviciosa, 33300 Asturias, Spain.
authors.forename: Ana
authors.initials: A
authors.lastname: Belén Flórez
authors.affiliation: Departamento de Microbiología y Bioquímica, Instituto de Productos Lácteos de Asturias (IPLA-CSIC), Paseo Río Linares s/n, Villaviciosa, 33300 Asturias, Spain ; Dipartimento di Biotecnologie, Università Degli Studi di Verona, Strada Le Grazie, 15, 37134 Verona, Italy.
authors.forename: Ángel
authors.initials: Á
authors.lastname: Alegría
authors.affiliation: Dipartimento di Biotecnologie, Università Degli Studi di Verona, Strada Le Grazie, 15, 37134 Verona, Italy.
authors.forename: Franca
authors.identifier: 0000-0002-7443-1538
authors.initials: F
authors.lastname: Rossi
authors.affiliation: Departamento de Microbiología y Bioquímica, Instituto de Productos Lácteos de Asturias (IPLA-CSIC), Paseo Río Linares s/n, Villaviciosa, 33300 Asturias, Spain.
authors.forename: Susana
authors.initials: S
authors.lastname: Delgado
authors.affiliation: Dipartimento di Biotecnologie, Università Degli Studi di Verona, Strada Le Grazie, 15, 37134 Verona, Italy.
authors.forename: Giovanna E
authors.identifier: 0000-0002-6506-6911
authors.initials: GE
authors.lastname: Felis
authors.affiliation: Dipartimento di Biotecnologie, Università Degli Studi di Verona, Strada Le Grazie, 15, 37134 Verona, Italy.
authors.forename: Sandra
authors.identifier: 0000-0002-2565-7557
authors.initials: S
authors.lastname: Torriani
authors.affiliation: Departamento de Microbiología y Bioquímica, Instituto de Productos Lácteos de Asturias (IPLA-CSIC), Paseo Río Linares s/n, Villaviciosa, 33300 Asturias, Spain.
authors.forename: Baltasar
authors.identifier: 0000-0001-5634-6543
authors.initials: B
authors.lastname: Mayo
mesh_terms: D000900:Anti-Bacterial Agents / Q000494:pharmacology; D001419:Bacteria / Q000187:drug effects / Q000302:isolation & purification* / Q000378:metabolism*; D001426:Bacterial Proteins / Q000032:analysis*; D002611:Cheese / Q000032:analysis / Q000382:microbiology*; D024881:Drug Resistance, Bacterial / Q000502:physiology*; D004917:Erythromycin / Q000494:pharmacology*; D005504:Food Analysis; D019649:Food Industry; D005516:Food Microbiology; D007558:Italy; D013752:Tetracycline / Q000494:pharmacology*
chemical_list: D000900:Anti-Bacterial Agents; D001426:Bacterial Proteins; D004917:Erythromycin; D013752:Tetracycline