title: Identification and characterization of 5'-flanking region of the human riboflavin transporter 1 gene (SLC52A1).
abstract: The human SLC52A1 gene encodes the riboflavin transporter-1 (RFVT-1), a plasma membrane protein that transports vitamin B2 (riboflavin, RF) into cells, and thus, plays a role in controlling cellular homeostasis of RF in those tissues that express the carrier protein (e.g. placenta and intestine). Currently, there is nothing known about transcriptional regulation of the SLC52A1 gene, therefore, we aimed to clone and characterize its 5'-flanking region. Using rapid amplification of the cDNA ends (5'-RACE), we identified one transcription start site (TSS). A 579 bp segment of the 5'-flanking region of this gene was cloned which exhibited robust promoter activity upon transfection in human intestinal epithelial cells. Deletion analysis revealed that the core promoter activity to be embedded in a region between -234 and -23 that lacked TATA element, was GC-rich, and harbored several putative cis-regulatory sites including KLFs, AP-2, EGRF and Sp-1. Mutating each of these sites led to a significant decrease in promoter activity (which was highest for the Sp-1 site), suggesting their possible involvement in regulating SLC52A1 transcription. Focusing on the Sp-1 site, EMSA, super-shift and ChIP analysis was performed that established the interaction of the Sp-1 transcription factor with the SLC52A1 promoter; also, co-transfection of the minimal SLC52A1 promoter with an Sp-1 containing vector in Drosophila SL-2 cells led to significant promoter activation. These results are the first to reveal the identity of the minimal SLC52A1 promoter and to establish an important role for Sp-1 in its activity.
authors.affiliation: Department of Medicine and Physiology/Biophysics, University of California-Irvine, Irvine, CA 92697, USA; Department of Medical Research, Veterans Affairs Medical Center, Long Beach, CA 90822, USA.
authors.forename: Subrata
authors.initials: S
authors.lastname: Sabui
authors.affiliation: Department of Medicine and Physiology/Biophysics, University of California-Irvine, Irvine, CA 92697, USA; Department of Medical Research, Veterans Affairs Medical Center, Long Beach, CA 90822, USA.
authors.forename: Abhisek
authors.initials: A
authors.lastname: Ghosal
authors.affiliation: Department of Medicine and Physiology/Biophysics, University of California-Irvine, Irvine, CA 92697, USA; Department of Medical Research, Veterans Affairs Medical Center, Long Beach, CA 90822, USA. Electronic address: hmsaid@uci.edu.
authors.forename: Hamid M
authors.initials: HM
authors.lastname: Said
mesh_terms: D024506:5' Flanking Region; D000818:Animals; D001483:Base Sequence; D002460:Cell Line; D047369:Chromatin Immunoprecipitation; D017931:DNA Primers; D004330:Drosophila; D024202:Electrophoretic Mobility Shift Assay; D006801:Humans; D007413:Intestinal Mucosa / Q000166:cytology / Q000378:metabolism; D011401:Promoter Regions, Genetic; D043562:Receptors, G-Protein-Coupled / Q000235:genetics*
chemical_list: D017931:DNA Primers; D043562:Receptors, G-Protein-Coupled; C000594932:SLC52A1 protein, human
keywords: Minimal promoter; Riboflavin transporter; SLC52A1; Transcription regulation