title: Meeting new challenges: The 2014 HUPO-PSI/COSMOS Workshop: 13-15 April 2014, Frankfurt, Germany.
abstract: The Annual 2014 Spring Workshop of the Proteomics Standards Initiative (PSI) of the Human Proteome Organization (HUPO) was held this year jointly with the metabolomics COordination of Standards in MetabOlomicS (COSMOS) group. The range of existing MS standards (mzML, mzIdentML, mzQuantML, mzTab, TraML) was reviewed and updated in the light of new methodologies and advances in technologies. Adaptations to meet the needs of the metabolomics community were incorporated and a new data format for NMR, nmrML, was presented. The molecular interactions workgroup began work on a new version of the existing XML data interchange format. PSI-MI XML3.0 will enable the capture of more abstract data types such as protein complex topology derived from experimental data, allosteric binding, and dynamic interactions. Further information about the work of the HUPO-PSI can be found at http://www.psidev.info.
authors.affiliation: European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.
authors.forename: Sandra
authors.initials: S
authors.lastname: Orchard
authors.forename: Juan Pablo
authors.initials: JP
authors.lastname: Albar
authors.forename: Pierre-Alain
authors.initials: PA
authors.lastname: Binz
authors.forename: Carsten
authors.initials: C
authors.lastname: Kettner
authors.forename: Andrew R
authors.initials: AR
authors.lastname: Jones
authors.forename: Reza M
authors.initials: RM
authors.lastname: Salek
authors.forename: Juan Antonio
authors.initials: JA
authors.lastname: Vizcaino
authors.forename: Eric W
authors.initials: EW
authors.lastname: Deutsch
authors.forename: Henning
authors.initials: H
authors.lastname: Hermjakob
mesh_terms: D044962:Data Compression / Q000379:methods; D030562:Databases, Protein; D005858:Germany; D006801:Humans; D013058:Mass Spectrometry / Q000379:methods; D055432:Metabolomics / Q000193:education / Q000379:methods; D025941:Protein Interaction Mapping / Q000379:methods; D020543:Proteome / Q000032:analysis* / Q000378:metabolism; D040901:Proteomics / Q000193:education / Q000379:methods*; D012984:Software
chemical_list: D020543:Proteome