title: [The preliminary study of structure variation related to keloid based on the whole-gene resequencing technique].
abstract: OBJECTIVE
  To investigate the genome structure variation (SV) related with keloid using the whole-gene resequencing technology.
  
  
  METHODS
  We studied a keloid pedigree containing 4 generation of 27 people. 5 people (4 cases of keloid patients, and 1 case of normal) were selected to extract the genomic DNA. Then the whole-gene resequencing technique was used to check the variations.
  
  
  RESULTS
  Through database comparison and variation annotation analysis, we obtained 2 SVs associated with keloid formation. We used DAVID software to do the gene ontology and pathway analysis. We found a 168 bp inversion in gene tetraspanin 8 (TSPAN8) in all keloid patients, which contained the forth exon of TSPAN8.
  
  
  CONCLUSIONS
  There was no report about SVs related to keloid. In this study, we found 2 SVs associated with keloid, especially TSPAN8. The tumor cells express the TSPAN8 can up-regulate the vascular endothelial growth factor and its receptors, promote the adjacent fibroblasts secrete matrix metalloproteinases and uridylyl phosphate adenosine. So we hypothesis that the inversion of the forth exon in TSPAN8 may lead to the signal transduction disorder in the keloid patients. This study was a preliminary research. It needs a further study containing large sample to confirm.
authors.forename: Chang
authors.initials: C
authors.lastname: Liu
authors.forename: Guodong
authors.initials: G
authors.lastname: Teng
authors.forename: Minliang
authors.initials: M
authors.lastname: Chen
authors.forename: Kui
authors.initials: K
authors.lastname: Ma
authors.forename: Tongtong
authors.initials: T
authors.lastname: Yan
mesh_terms: D001483:Base Sequence; D005260:Female; D006801:Humans; D007627:Keloid / Q000235:genetics*; D008297:Male; D008969:Molecular Sequence Data; D010375:Pedigree; D017421:Sequence Analysis / Q000379:methods*; D059470:Tetraspanins / Q000235:genetics*
chemical_list: C065609:TSPAN8 protein, human; D059470:Tetraspanins