title: Wanted: scalable tracers for diffusion measurements.
abstract: Scalable tracers are potentially a useful tool to examine diffusion mechanisms and to predict diffusion coefficients, particularly for hindered diffusion in complex, heterogeneous, or crowded systems. Scalable tracers are defined as a series of tracers varying in size but with the same shape, structure, surface chemistry, deformability, and diffusion mechanism. Both chemical homology and constant dynamics are required. In particular, branching must not vary with size, and there must be no transition between ordinary diffusion and reptation. Measurements using scalable tracers yield the mean diffusion coefficient as a function of size alone; measurements using nonscalable tracers yield the variation due to differences in the other properties. Candidate scalable tracers are discussed for two-dimensional (2D) diffusion in membranes and three-dimensional diffusion in aqueous solutions. Correlations to predict the mean diffusion coefficient of globular biomolecules from molecular mass are reviewed briefly. Specific suggestions for the 3D case include the use of synthetic dendrimers or random hyperbranched polymers instead of dextran and the use of core-shell quantum dots. Another useful tool would be a series of scalable tracers varying in deformability alone, prepared by varying the density of crosslinking in a polymer to make say "reinforced Ficoll" or "reinforced hyperbranched polyglycerol."
authors.affiliation: Department of Biochemistry and Molecular Medicine, University of California , One Shields Ave., Davis, California 95616, United States.
authors.forename: Michael J
authors.initials: MJ
authors.lastname: Saxton
mesh_terms: D002462:Cell Membrane / Q000737:chemistry / Q000378:metabolism; D050091:Dendrimers / Q000737:chemistry; D003911:Dextrans / Q000737:chemistry; D004058:Diffusion; D005362:Ficoll / Q000737:chemistry; D005456:Fluorescent Dyes / Q000737:chemistry; D005990:Glycerol / Q000737:chemistry; D008565:Membrane Proteins / Q000737:chemistry / Q000378:metabolism; D011108:Polymers / Q000737:chemistry*; D045663:Quantum Dots / Q000737:chemistry
chemical_list: D050091:Dendrimers; D003911:Dextrans; D005456:Fluorescent Dyes; D008565:Membrane Proteins; D011108:Polymers; C043941:polyglycerol; D005362:Ficoll; D005990:Glycerol