title: The association between the upper digestive tract microbiota by HOMIM and oral health in a population-based study in Linxian, China.
abstract: BACKGROUND
  Bacteria affect oral health, but few studies have systematically examined the role of bacterial communities in oral diseases. We examined this relationship in a large population-based Chinese cancer screening cohort.
  
  
  METHODS
  Human Oral Microbe Identification Microarrays were used to test for the presence of 272 human oral bacterial species (97 genera) in upper digestive tract (UDT) samples collected from 659 participants. Oral health was assessed using US NHANES (National Health and Nutrition Examination Survey) protocols. We assessed both dental health (total teeth missing; tooth decay; and the decayed, missing, and filled teeth (DMFT) score) and periodontal health (bleeding on probing (BoP) extent score, loss of attachment extent score, and a periodontitis summary estimate).
  
  
  RESULTS
  Microbial richness, estimated by number of genera per sample, was positively correlated with BoP score (P = 0.015), but negatively correlated with tooth decay and DMFT score (P = 0.008 and 0.022 respectively). Regarding β-diversity, as estimated by the UniFrac distance matrix for pairwise differences among samples, at least one of the first three principal components of the UniFrac distance matrix was correlated with the number of missing teeth, tooth decay, DMFT, BoP, or periodontitis. Of the examined genera, Parvimonas was positively associated with BoP and periodontitis. Veillonellacease [G-1] was associated with a high DMFT score, and Filifactor and Peptostreptococcus were associated with a low DMFT score.
  
  
  CONCLUSIONS
  Our results suggest distinct relationships between UDT microbiota and dental and periodontal health. Poor dental health was associated with a less microbial diversity, whereas poor periodontal health was associated with more diversity and the presence of potentially pathogenic species.
authors.affiliation: Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Rockville, MD, USA. yug3@mail.nih.gov.
authors.forename: Guoqin
authors.initials: G
authors.lastname: Yu
authors.forename: Bruce A
authors.initials: BA
authors.lastname: Dye
authors.forename: Mitchell H
authors.initials: MH
authors.lastname: Gail
authors.forename: Jianxin
authors.initials: J
authors.lastname: Shi
authors.forename: Vanja
authors.initials: V
authors.lastname: Klepac-Ceraj
authors.forename: Bruce J
authors.initials: BJ
authors.lastname: Paster
authors.forename: Guo-Qing
authors.initials: GQ
authors.lastname: Wang
authors.forename: Wen-Qiang
authors.initials: WQ
authors.lastname: Wei
authors.forename: Jin-Hu
authors.initials: JH
authors.lastname: Fan
authors.forename: You-Lin
authors.initials: YL
authors.lastname: Qiao
authors.forename: Sanford M
authors.initials: SM
authors.lastname: Dawsey
authors.forename: Neal D
authors.initials: ND
authors.lastname: Freedman
authors.forename: Christian C
authors.initials: CC
authors.lastname: Abnet
mesh_terms: D000328:Adult; D000368:Aged; D002681:China / Q000453:epidemiology; D055113:Chronic Periodontitis / Q000453:epidemiology* / Q000382:microbiology / Q000473:pathology; D005260:Female; D041981:Gastrointestinal Tract / Q000382:microbiology; D006090:Gram-Negative Bacteria / Q000302:isolation & purification; D006094:Gram-Positive Bacteria / Q000302:isolation & purification; D006801:Humans; D008297:Male; D008875:Middle Aged; D009749:Nutrition Surveys; D009909:Oral Health; D012720:Severity of Illness Index; D012959:Socioeconomic Factors