title: Image decoding of photonic crystal beads array in the microfluidic chip for multiplex assays.
abstract: Along with the miniaturization and intellectualization of biomedical instruments, the increasing demand of health monitoring at anywhere and anytime elevates the need for the development of point of care testing (POCT). Photonic crystal beads (PCBs) as one kind of good encoded microcarriers can be integrated with microfluidic chips in order to realize cost-effective and high sensitive multiplex bioassays. However, there are difficulties in analyzing them towards automated analysis due to the characters of the PCBs and the unique detection manner. In this paper, we propose a strategy to take advantage of automated image processing for the color decoding of the PCBs array in the microfluidic chip for multiplex assays. By processing and alignment of two modal images of epi-fluorescence and epi-white light, every intact bead in the image is accurately extracted and decoded by PC colors, which stand for the target species. This method, which shows high robustness and accuracy under various configurations, eliminates the high hardware requirement of spectroscopy analysis and user-interaction software, and provides adequate supports for the general automated analysis of POCT based on PCBs array.
authors.affiliation: 1] State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, 210096, China [2] Laboratory of Environment and Biosafety Research Institute of Southeast University in Suzhou, Suzhou 215123, China.
authors.forename: Junjie
authors.initials: J
authors.lastname: Yuan
authors.affiliation: 1] State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, 210096, China [2] Laboratory of Environment and Biosafety Research Institute of Southeast University in Suzhou, Suzhou 215123, China.
authors.forename: Xiangwei
authors.initials: X
authors.lastname: Zhao
authors.affiliation: 1] State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, 210096, China [2] Laboratory of Environment and Biosafety Research Institute of Southeast University in Suzhou, Suzhou 215123, China.
authors.forename: Xiaoxia
authors.initials: X
authors.lastname: Wang
authors.affiliation: 1] State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, 210096, China [2] Laboratory of Environment and Biosafety Research Institute of Southeast University in Suzhou, Suzhou 215123, China.
authors.forename: Zhongze
authors.initials: Z
authors.lastname: Gu
mesh_terms: D057205:Automation, Laboratory; D007091:Image Processing, Computer-Assisted; D044085:Microfluidics / Q000295:instrumentation / Q000379:methods*; D061848:Optical Imaging / Q000295:instrumentation / Q000379:methods; D017785:Photons; D019095:Point-of-Care Systems