Genome sequence of mungbean and insights into evolution within Vigna species.
Mungbean (Vigna radiata) is a fast-growing, warm-season legume crop that is primarily cultivated in developing countries of Asia. Here we construct a draft genome sequence of mungbean to facilitate genome research into the subgenus Ceratotropis, which includes several important dietary legumes in Asia, and to enable a better understanding of the evolution of leguminous species. Based on the de novo assembly of additional wild mungbean species, the divergence of what was eventually domesticated and the sampled wild mungbean species appears to have predated domestication. Moreover, the de novo assembly of a tetraploid Vigna species (V. reflexo-pilosa var. glabra) provides genomic evidence of a recent allopolyploid event. The species tree is constructed using de novo RNA-seq assemblies of 22 accessions of 18 Vigna species and protein sets of Glycine max. The present assembly of V. radiata var. radiata will facilitate genome research and accelerate molecular breeding of the subgenus Ceratotropis.
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Yang Jae
YJ
Kang
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Sue K
SK
Kim
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Moon Young
MY
Kim
1] Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea [2] Indonesian Center for Agricultural Biotechnology and Genetic Resources Research and Development, IAARD, Jl. Tentara Pelajar 3A, Bogor 16111, Indonesia.
Puji
P
Lestari
Upland Crop Division, National Institute of Crop Science, Rural Development Administration, Suwon 441-770, Korea.
Kil Hyun
KH
Kim
Division of Plant Biotechnology, College of Agriculture and Life Science, Chonnam National University, Gwangju 500-757, Korea.
Bo-Keun
BK
Ha
Department of Plant Bioscience, College of Natural Resources &Life Science, Pusan National University, Pusan 627-706, Korea.
Tae Hwan
TH
Jun
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Won Joo
WJ
Hwang
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Taeyoung
T
Lee
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Jayern
J
Lee
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Sangrea
S
Shim
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Min Young
MY
Yoon
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Young Eun
YE
Jang
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Kwang Soo
KS
Han
Department of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand.
Puntaree
P
Taeprayoon
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Na
N
Yoon
Department of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand.
Prakit
P
Somta
Department of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand.
Patcharin
P
Tanya
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Kwang Soo
KS
Kim
National Agrobiodiversity Center, National Academy of Agricultural Science, RDA, 88-20, Seodun-Dong, Suwon 441-707, Korea.
Jae-Gyun
JG
Gwag
Upland Crop Division, National Institute of Crop Science, Rural Development Administration, Suwon 441-770, Korea.
Jung-Kyung
JK
Moon
Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea.
Yeong-Ho
YH
Lee
The Agricultural Genome Center, National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, Korea.
Beom-Seok
BS
Park
L.H. Bailey Hortorium, Department of Plant Biology, Cornell University, 412 Mann Library, Ithaca, NewYork 14853, USA.
Aureliano
A
Bombarely
L.H. Bailey Hortorium, Department of Plant Biology, Cornell University, 412 Mann Library, Ithaca, NewYork 14853, USA.
Jeffrey J
JJ
Doyle
Center for Applied Genetic Technologies, University of Georgia, Athens, Georgia, USA.
Scott A
SA
Jackson
Biotechnology/Molecular Breeding, AVRDC-The World Vegetable Center, 60, Yi-Min Liao, Tainan 74199, Taiwan.
Roland
R
Schafleitner
Department of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand.
Peerasak
P
Srinives
Centre of Excellence in Genomics, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, Andhra Pradesh, India.
Rajeev K
RK
Varshney
1] Department of Plant Science and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea [2] Plant Genomics and Breeding Institute, Seoul National University, Seoul 151-921, Korea.
Suk-Ha
SH
Lee
D018744:DNA, Plant / Q000235:genetics*; D019143:Evolution, Molecular; D007887:Fabaceae / Q000235:genetics*; D020869:Gene Expression Profiling; D018745:Genome, Plant / Q000235:genetics*; D008969:Molecular Sequence Data; D010802:Phylogeny; D056910:Republic of Korea; D017421:Sequence Analysis
D018744:DNA, Plant