title: Complete mitochodrial genome of Vanmanenia pingchowensis (Cypriniformes, Cyprinidae).
abstract: The complete mitochondrial genome of Vanmanenia pingchowensis was determined in this study. The gene composition, arrangement and transcriptional orientation in V. pingchowensis mitogenome were identical to most vertebrates. The complete mitogenome of V. pingchowensis was 15,560 bp in size with 13 protein coding genes, 22 tRNA genes, and a control region. Two start codon patterns and three stop codon patterns were found in protein-coding genes. Only the tRNA-Ser2 could not fold into a typical clover-leaf secondary structure for lacking the dihydrouridine arm. Sequences alignment results suggest that the complete mitogenome of V. pingchowensis is an efficient tool to study molecular phylogenetics, biogeography and adaptive evolution of this lineage.
authors.affiliation: a College of Life Science, Southwest University , Chongqing , P. R. China .|b Key Laboratory of Freshwater Biodiversity Conservation , Ministry of Agriculture of China. Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences , Wuhan , Hubei Province , P. R. China , and.|c Fishery Environmental Monitoring Station, Fisheries Research Institute of Hunan Province , Changsha , P. R. China.
authors.forename: Zhiqiang
authors.initials: Z
authors.lastname: Liang
authors.affiliation: c Fishery Environmental Monitoring Station, Fisheries Research Institute of Hunan Province , Changsha , P. R. China.
authors.forename: Chongrui
authors.initials: C
authors.lastname: Wang
authors.affiliation: c Fishery Environmental Monitoring Station, Fisheries Research Institute of Hunan Province , Changsha , P. R. China.
authors.forename: Yuanan
authors.initials: Y
authors.lastname: Wu
authors.affiliation: c Fishery Environmental Monitoring Station, Fisheries Research Institute of Hunan Province , Changsha , P. R. China.
authors.forename: Hong
authors.initials: H
authors.lastname: Li
authors.affiliation: c Fishery Environmental Monitoring Station, Fisheries Research Institute of Hunan Province , Changsha , P. R. China.
authors.forename: Xiping
authors.initials: X
authors.lastname: Yuan
authors.affiliation: a College of Life Science, Southwest University , Chongqing , P. R. China .|b Key Laboratory of Freshwater Biodiversity Conservation , Ministry of Agriculture of China. Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences , Wuhan , Hubei Province , P. R. China , and.
authors.forename: Qiwei
authors.initials: Q
authors.lastname: Wei
mesh_terms: D000818:Animals; D001482:Base Composition / Q000235:genetics; D001483:Base Sequence / Q000235:genetics; D003530:Cyprinidae / Q000235:genetics*; D003531:Cypriniformes / Q000235:genetics; D004272:DNA, Mitochondrial / Q000235:genetics; D023061:Gene Order / Q000235:genetics; D050259:Genes, Mitochondrial / Q000235:genetics; D016678:Genome / Q000235:genetics; D054629:Genome, Mitochondrial / Q000235:genetics*; D010802:Phylogeny; D017422:Sequence Analysis, DNA / Q000379:methods; D000073336:Whole Genome Sequencing / Q000379:methods
chemical_list: D004272:DNA, Mitochondrial
keywords: Mitogenome; species identification; vanmanenia pingchowensis