title: Avoiding symmetry-breaking spatial non-uniformity in deformable image registration via a quasi-volume-preserving constraint.
abstract: The choice of a reference image typically influences the results of deformable image registration, thereby making it asymmetric. This is a consequence of a spatially non-uniform weighting in the cost function integral that leads to general registration inaccuracy. The inhomogeneous integral measure--which is the local volume change in the transformation, thus varying through the course of the registration--causes image regions to contribute differently to the objective function. More importantly, the optimization algorithm is allowed to minimize the cost function by manipulating the volume change, instead of aligning the images. The approaches that restore symmetry to deformable registration successfully achieve inverse-consistency, but do not eliminate the regional bias that is the source of the error. In this work, we address the root of the problem: the non-uniformity of the cost function integral. We introduce a new quasi-volume-preserving constraint that allows for volume change only in areas with well-matching image intensities, and show that such a constraint puts a bound on the error arising from spatial non-uniformity. We demonstrate the advantages of adding the proposed constraint to standard (asymmetric and symmetrized) demons and diffeomorphic demons algorithms through experiments on synthetic images, and real X-ray and 2D/3D brain MRI data. Specifically, the results show that our approach leads to image alignment with more accurate matching of manually defined neuroanatomical structures, better tradeoff between image intensity matching and registration-induced distortion, improved native symmetry, and lower susceptibility to local optima. In summary, the inclusion of this space- and time-varying constraint leads to better image registration along every dimension that we have measured it.
authors.affiliation: Athinoula A. Martinos Center for Biomedical Imaging, Radiology Department, Massachusetts General Hospital, Harvard Medical School, 149, 13th St., Room 2301, Charlestown, MA 02129, USA. Electronic address: iman@nmr.mgh.harvard.edu.
authors.forename: Iman
authors.initials: I
authors.lastname: Aganj
authors.affiliation: Athinoula A. Martinos Center for Biomedical Imaging, Radiology Department, Massachusetts General Hospital, Harvard Medical School, 149, 13th St., Room 2301, Charlestown, MA 02129, USA; Computer Science and Artificial Intelligence Laboratory, Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, 32 Vassar St., Cambridge, MA 02139, USA. Electronic address: mreuter@nmr.mgh.harvard.edu.
authors.forename: Martin
authors.initials: M
authors.lastname: Reuter
authors.affiliation: Athinoula A. Martinos Center for Biomedical Imaging, Radiology Department, Massachusetts General Hospital, Harvard Medical School, 149, 13th St., Room 2301, Charlestown, MA 02129, USA; Computer Science and Artificial Intelligence Laboratory, Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, 32 Vassar St., Cambridge, MA 02139, USA. Electronic address: msabuncu@nmr.mgh.harvard.edu.
authors.forename: Mert R
authors.initials: MR
authors.lastname: Sabuncu
authors.affiliation: Athinoula A. Martinos Center for Biomedical Imaging, Radiology Department, Massachusetts General Hospital, Harvard Medical School, 149, 13th St., Room 2301, Charlestown, MA 02129, USA; Computer Science and Artificial Intelligence Laboratory, Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, 32 Vassar St., Cambridge, MA 02139, USA; Harvard-MIT Division of Health Sciences and Technology, 77 Massachusetts Ave., Room E25-519, Cambridge, MA 02139, USA. Electronic address: fischl@nmr.mgh.harvard.edu.
authors.forename: Bruce
authors.initials: B
authors.lastname: Fischl
mesh_terms: D000465:Algorithms; D001921:Brain / Q000033:anatomy & histology*; D001931:Brain Mapping / Q000379:methods*; D006801:Humans; D007089:Image Enhancement / Q000379:methods*; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D007568:Jaw / Q000033:anatomy & histology; D008279:Magnetic Resonance Imaging / Q000379:methods*; D011859:Radiography / Q000379:methods
keywords: Deformable image registration; Integral non-uniformity; Inverse-consistency; Symmetry; Volume-preserving constraints