title: Molecular analysis of Staphylococcus aureus pathogenicity islands (SaPI)  and their superantigens combination of food samples.
abstract: Staphylococcus aureus produces a wide variety of superantigenic activity Staphylococcal enterotoxins (SE) and they are a major cause of food poisoning. These superantigens are associated with mobile genetic elements such as plasmids, prophages and S. aureus pathogenicity islands (SaPI). The presence of well-known eight SaPI integrase and 13 enterotoxin genes (sea, seb, sec, sed, see, seg, seh, sei, sej, sel, sek, seq, and tst) in 93 S. aureus strains were investigated. All S. aureus isolates were characterized by pulsed-field gel electrophoresis (PFGE), and the genes were detected using five sets of multiplex PCR (mPCR). The most predominant toxin genes were sea (19%), seb (15%), sec (54%), sell (48%), selk (46%), selq (52%), seg (22%), and sei (19%). Analysis showed that many S. aureus isolates harbored multiple toxin genes. An mPCR-based assay was developed for the determination of all SaPI and their superantigen gene combinations. Twenty three isolates revealed the gene combination sec, sell and tst, typical of the SaPIbov1 and SaPIn1/m1 pathogenicity islands. Twelve isolates revealed the selk and selq gene combination consistent with SaPI3. Eight isolates exhibited the sec and sell genes without the tst gene typical of SaPImw2. We established a correlation between superantigenic toxin genotypes in S. aureus in terms of combinations of toxin gene-encoding SaPI. These results provide a rapid method for determining superantigenic toxin genotypes in S. aureus strains. A total of 24 PFGE patterns were generated. To our knowledge, this is a first study analyzing the correlation of all known SaPI and their enterotoxins in S. aureus using mPCR.
authors.affiliation: Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, Institute of Chemical Technology, Prague, Czech Republic. Babak.Alibayov@vscht.cz
authors.forename: Babek
authors.initials: B
authors.lastname: Alibayov
authors.forename: Kamila
authors.initials: K
authors.lastname: Zdenkova
authors.forename: Hana
authors.initials: H
authors.lastname: Sykorova
authors.forename: Katerina
authors.initials: K
authors.lastname: Demnerova
mesh_terms: D000818:Animals; D016000:Cluster Analysis; D016521:Electrophoresis, Gel, Pulsed-Field; D004768:Enterotoxins / Q000235:genetics; D005506:Food Contamination; D005516:Food Microbiology; D044404:Genomic Islands; D006801:Humans; D060885:Multiplex Polymerase Chain Reaction / Q000379:methods*; D013211:Staphylococcus aureus / Q000145:classification / Q000235:genetics*; D018089:Superantigens / Q000235:genetics*
chemical_list: D004768:Enterotoxins; D018089:Superantigens