title: Synthesis, DNA binding and complex formation reactions of 3-amino-5,6-dimethyl-1,2,4-triazine with Pd(II) and some selected biorelevant ligands.
abstract: With the purpose of studying the binding behavior of Pd(II) complexes with DNA as the main biological target, and their ability to penetrate reasonably into tumour cells and destroy their replication ability, Pd(ADT)Cl2 complex was synthesized and characterized, where ADT is 3-amino-5,6-dimethyl-1,2,4-triazine. Stoichiometry and stability constants of the complexes formed between various biologically relevant ligands (amino acids, amides, DNA constituents, and dicarboxylic acids) and [Pd(ADT)(H2O)2](2+) were investigated at 25°C and at constant 0.1moldm(-3) ionic strength. The concentration distribution diagrams of the various species formed are evaluated. Further investigation of the binding properties of the diaqua complex [Pd(ADT)(H2O)2](2+) with calf thymus DNA (CT-DNA) was investigated by UV-vis spectroscopy. The intrinsic binding constants (Kb) calculated from UV-vis absorption studies was calculated to be 2.00×10(3)moldm(-3). The calculated (Kb) value was found to be of lower magnitude than that of the classical intercalator EB (Ethidium bromide) (Kb=1.23(±0.07)×10(5)moldm(-3)) suggesting an electrostatic and/or groove binding mode for the interaction with CT-DNA. Thermal denaturation has been systematically studied by spectrophotometric method and the calculated ΔTm was nearly 5°C, supporting the electrostatic and/or groove binding mode for the interaction between the complex and CT-DNA.
authors.affiliation: Department of Chemistry, Faculty of Science for Girls, King Abdulaziz University, 50918, Jeddah 21533, Saudi Arabia; Department of Chemistry, Faculty of Science, Cairo University, 12613 Giza, Egypt. Electronic address: azzashoukry@yahoo.com.
authors.forename: Azza A
authors.initials: AA
authors.lastname: Shoukry
authors.affiliation: Department of Chemistry, Faculty of Science for Girls, King Abdulaziz University, 50918, Jeddah 21533, Saudi Arabia.
authors.forename: Reem M
authors.initials: RM
authors.lastname: Alghanmi
mesh_terms: D000577:Amides / Q000737:chemistry; D000596:Amino Acids / Q000737:chemistry; D000818:Animals; D002417:Cattle; D056831:Coordination Complexes / Q000138:chemical synthesis* / Q000737:chemistry / Q000378:metabolism*; D004247:DNA / Q000378:metabolism*; D003998:Dicarboxylic Acids; D008024:Ligands; D009691:Nucleic Acid Denaturation; D009994:Osmolar Concentration; D010165:Palladium / Q000737:chemistry*; D013696:Temperature; D014227:Triazines / Q000138:chemical synthesis* / Q000737:chemistry / Q000378:metabolism*
chemical_list: D000577:Amides; D000596:Amino Acids; D056831:Coordination Complexes; D003998:Dicarboxylic Acids; D008024:Ligands; D014227:Triazines; C093444:1,2,4-triazine; D010165:Palladium; D004247:DNA; C427203:calf thymus DNA
keywords: 3-Amino-5,6-dimethyl-1,2,4-triazine; Biorelevant ligands; Calf thymus DNA; Palladium(II); Stability constant; UV–vis spectroscopy