title: Complete mitochondrial genome of Sebastes longispinis (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea.
abstract: Sebastes longispinis is considered to be a valid species despite its incomplete mitochondrial lineage. To obtain basic information of this species, the complete mitochondrial DNA sequence of S. longispinis was determined by next-generation sequencing. The complete sequence is 16,445 bp in length and comprised of 13 protein-coding genes (PCGs), 2 rRNAs, 22 tRNAs and a control region. The complete mitogenome contains 28.0% A, 26.7% T, 17.1% G and 28.3% C nucleotides, with a slight AT bias (54.6%). The start codon of each PCG is ATG, except for COX1 (GTG). The stop codons found in the PCGs are mainly TAA, except for ND1 (TAG), ND3 (TAG), ND4 (AGA), and Cytb (incomplete termination codon, T). The tRNAs have a typical cloverleaf form, except for tRNA(Ser (AGY)), which lacks the DHU arm. The mitogenome of S. longispinis can be used to address the incomplete mitochondrial lineages in allied species of the Scorpaenidae.
authors.affiliation: a East Sea Environment Research Division , Korea Institute of Ocean Science & Technology , Hujung-ri, Jukbyeon-myun, Uljin-gun, Gyeongbuk , Republic of Korea .|b Department of Convergence Study on the Ocean Science and Technology , Ocean Science and Technology School, Korea Maritime and Ocean University , Dongsamg-dong, Yeongdo-gu , Busan , Republic of Korea .|c Department of Marine Biotechnology , Korea University of Science & Technology , Daejeon , Republic of Korea .
authors.forename: Yo-Soon
authors.initials: YS
authors.lastname: Jang
authors.affiliation: d Marine Ecosystem Research Division , Korea Institute of Ocean Science & Technology , Sangrok-gu , Ansan , Republic of Korea , and.
authors.forename: Eun Kyung
authors.initials: EK
authors.lastname: Lee
authors.affiliation: d Marine Ecosystem Research Division , Korea Institute of Ocean Science & Technology , Sangrok-gu , Ansan , Republic of Korea , and.|e Department of Marine Biology , Korea University of Science & Technology , Daejeon , Republic of Korea.
authors.forename: Sung
authors.initials: S
authors.lastname: Kim
mesh_terms: D000818:Animals; D018387:Codon, Initiator; D018388:Codon, Terminator; D004247:DNA / Q000737:chemistry / Q000302:isolation & purification / Q000378:metabolism; D004272:DNA, Mitochondrial / Q000737:chemistry / Q000302:isolation & purification / Q000378:metabolism; D054629:Genome, Mitochondrial; D059014:High-Throughput Nucleotide Sequencing; D016366:Open Reading Frames / Q000235:genetics; D010473:Perciformes / Q000235:genetics*; D012335:RNA, Ribosomal / Q000737:chemistry / Q000302:isolation & purification / Q000378:metabolism; D012343:RNA, Transfer / Q000737:chemistry / Q000302:isolation & purification / Q000378:metabolism; D056910:Republic of Korea; D017422:Sequence Analysis, DNA
chemical_list: D018387:Codon, Initiator; D018388:Codon, Terminator; D004272:DNA, Mitochondrial; D012335:RNA, Ribosomal; D004247:DNA; D012343:RNA, Transfer
keywords: Mitochondrial genome; Sebastes longispinis; Sebastinae; rockfish