title: EPR monitored redox titration of the cofactors of Saccharomyces cerevisiae Nar1.
abstract: Electron Paramagnetic Resonance (EPR) monitored redox titrations are a powerful method to determine the midpoint potential of cofactors in proteins and to identify and quantify the cofactors in their detectable redox state. The technique is complementary to direct electrochemistry (voltammetry) approaches, as it does not offer information on electron transfer rates, but does establish the identity and redox state of the cofactors in the protein under study. The technique is widely applicable to any protein containing an electron paramagnetic resonance (EPR) detectable cofactor. A typical titration requires 2 ml protein with a cofactor concentration in the range of 1-100 µM. The protein is titrated with a chemical reductant (sodium dithionite) or oxidant (potassium ferricyanide) in order to poise the sample at a certain potential. A platinum wire and a Ag/AgCl reference electrode are connected to a voltmeter to measure the potential of the protein solution A set of 13 different redox mediators is used to equilibrate between the redox cofactors of the protein and the electrodes. Samples are drawn at different potentials and the Electron Paramagnetic Resonance spectra, characteristic for the different redox cofactors in the protein, are measured. The plot of the signal intensity versus the sample potential is analyzed using the Nernst equation in order to determine the midpoint potential of the cofactor.
authors.affiliation: Department of Biotechnology, Delft University of Technology; P.L.Hagedoorn@tudelft.nl.
authors.forename: Peter-Leon
authors.initials: PL
authors.lastname: Hagedoorn
authors.affiliation: Department of Biotechnology, Delft University of Technology.
authors.forename: Laura
authors.initials: L
authors.lastname: van der Weel
authors.affiliation: Department of Biotechnology, Delft University of Technology.
authors.forename: Wilfred R
authors.initials: WR
authors.lastname: Hagen
mesh_terms: D003067:Coenzymes / Q000032:analysis* / Q000737:chemistry / Q000378:metabolism; D003217:Conductometry / Q000379:methods; D004227:Dithionite / Q000737:chemistry; D004578:Electron Spin Resonance Spectroscopy / Q000379:methods*; D005292:Ferricyanides / Q000737:chemistry; D006864:Hydrogenase / Q000032:analysis* / Q000737:chemistry / Q000378:metabolism; D007506:Iron-Sulfur Proteins / Q000032:analysis* / Q000737:chemistry / Q000378:metabolism; D010084:Oxidation-Reduction; D012441:Saccharomyces cerevisiae / Q000201:enzymology*; D029701:Saccharomyces cerevisiae Proteins / Q000032:analysis* / Q000737:chemistry / Q000378:metabolism
chemical_list: D003067:Coenzymes; D005292:Ferricyanides; D007506:Iron-Sulfur Proteins; D029701:Saccharomyces cerevisiae Proteins; D004227:Dithionite; D006864:Hydrogenase; C501975:Nar1 protein, S cerevisiae; C028033:potassium ferricyanide