title: Predicted structure model of Bungarotoxin from Bungarus fasciatus snake.
abstract: Snake venoms are cocktails comprising combinations of different proteins, peptides, enzymes and toxins. Snake toxins have diverse characteristics having different molecular configuration, structure and mode of action. Many toxins derived from snake venom have distinct pharmacological activities. Venom from Bungarus fasciatus (commonly known as banded krait) is a species of elapid snake found on the South East Asia and Indian sub-continent, mainly contains neurotoxins. Beta bungartotoxin is the major fraction of Bungarus venom and particularly act pre-synaptically by obstructing neurotransmitter release. This toxin in other snake species functionally forms a heterodimer containing two different subunits (A and B). Dimerization of these two chains is a pre-requisite for the proper functionality of this protein. However, B. fasciatus bungartotoxin contains only B chain and their structural orientation in yet to be resolved. Therefore, it is of interest to describe the predicted structure model of the toxin for functional insights. In this work we analyzed the neurotoxic nature, their alignments, secondary and three dimensional structures, functions, active sites and stability with the help of different bioinformatical tools. A comprehensive analysis of the predicted model provides approaching to the functional interpretation of its molecular action.
authors.affiliation: Department of Genetic Engineering and Biotechnology, Faculty of Life and Earth Science, University of Rajshahi, Rajshahi-6205,Bangladesh ; Authors equally contributed.
authors.forename: Zahida Yesmin
authors.initials: ZY
authors.lastname: Roly
authors.affiliation: Department of Genetic Engineering and Biotechnology, Faculty of Life and Earth Science, University of Rajshahi, Rajshahi-6205,Bangladesh ; Authors equally contributed.
authors.forename: Sm Naimul
authors.initials: SN
authors.lastname: Hasan
authors.affiliation: Assistant Professor, Department of Genetic Engineering and Biotechnology, University of Rajshahi, Rajshahi -6205,Bangladesh.
authors.forename: Kmkb
authors.initials: K
authors.lastname: Ferdaus
authors.affiliation: Professor, Department of Genetic Engineering and Biotechnology, University of Rajshahi, Rajshahi-6205, Bangladesh.
authors.forename: Md Abu
authors.initials: MA
authors.lastname: Reza
keywords: 3D structure; Bioinformatics; Bungarotoxin; Snake venom