title: Proteomics of Colwellia psychrerythraea at subzero temperatures - a life with limited movement, flexible membranes and vital DNA repair.
abstract: The mechanisms that allow psychrophilic bacteria to remain metabolically active at subzero temperatures result from form and function of their proteins. We present first proteomic evidence of physiological changes of the marine psychrophile Colwellia psychrerythraea 34H (Cp34H) after exposure to subzero temperatures (-1, and -10°C in ice) through 8 weeks. Protein abundance was compared between different treatments to understand the effects of temperature and time, independently and jointly, within cells transitioning to, and being maintained in ice. Parallel [3H]-leucine and [3H]-thymidine incubations indicated active protein and DNA synthesis to -10°C. Mass spectrometry-based proteomics identified 1763 proteins across four experimental treatments. Proteins involved in osmolyte regulation and polymer secretion were found constitutively present across all treatments, suggesting that they are required for metabolic success below 0°C. Differentially abundant protein groups indicated a reallocation of resources from DNA binding to DNA repair and from motility to chemo-taxis and sensing. Changes to iron and nitrogen metabolism, cellular membrane structures, and protein synthesis and folding were also revealed. By elucidating vital strategies during life in ice, this study provides novel insight into the extensive molecular adaptations that occur in cold-adapted marine organisms to sustain cellular function in their habitat.
authors.affiliation: Department of Genome Sciences, University of Washington, Box 355065, Seattle, WA, 98195, USA.
authors.forename: Brook L
authors.initials: BL
authors.lastname: Nunn
authors.affiliation: Applied Physics Laboratory, Polar Science Center, University of Washington, Box 355640, Seattle, WA, 98195, USA.
authors.forename: Krystal V
authors.initials: KV
authors.lastname: Slattery
authors.affiliation: Applied Physics Laboratory, Polar Science Center, University of Washington, Box 355640, Seattle, WA, 98195, USA.
authors.forename: Karen A
authors.initials: KA
authors.lastname: Cameron
authors.affiliation: Department of Genome Sciences, University of Washington, Box 355065, Seattle, WA, 98195, USA.
authors.forename: Emma
authors.initials: E
authors.lastname: Timmins-Schiffman
authors.affiliation: Applied Physics Laboratory, Polar Science Center, University of Washington, Box 355640, Seattle, WA, 98195, USA.
authors.forename: Karen
authors.initials: K
authors.lastname: Junge
mesh_terms: D000222:Adaptation, Physiological / Q000235:genetics*; D034241:Alteromonadaceae / Q000235:genetics* / Q000378:metabolism*; D001426:Bacterial Proteins / Q000235:genetics / Q000378:metabolism*; D003080:Cold Temperature; D004260:DNA Repair; D007501:Iron / Q000378:metabolism; D009068:Movement; D009584:Nitrogen / Q000378:metabolism; D040901:Proteomics
chemical_list: D001426:Bacterial Proteins; D007501:Iron; D009584:Nitrogen