title: Genome Annotation and Curation Using MAKER and MAKER-P.
abstract: This unit describes how to use the genome annotation and curation tools MAKER and MAKER-P to annotate protein-coding and noncoding RNA genes in newly assembled genomes, update/combine legacy annotations in light of new evidence, add quality metrics to annotations from other pipelines, and map existing annotations to a new assembly. MAKER and MAKER-P can rapidly annotate genomes of any size, and scale to match available computational resources.
authors.affiliation: Eccles Institute of Human Genetics, University of Utah, Salt Lake City, Utah.
authors.forename: Michael S
authors.initials: MS
authors.lastname: Campbell
authors.affiliation: Eccles Institute of Human Genetics, University of Utah, Salt Lake City, Utah.|USTAR Center for Genetic Discovery, University of Utah, Salt Lake City, Utah.
authors.forename: Carson
authors.initials: C
authors.lastname: Holt
authors.affiliation: Eccles Institute of Human Genetics, University of Utah, Salt Lake City, Utah.|USTAR Center for Genetic Discovery, University of Utah, Salt Lake City, Utah.
authors.forename: Barry
authors.initials: B
authors.lastname: Moore
authors.affiliation: Eccles Institute of Human Genetics, University of Utah, Salt Lake City, Utah.|USTAR Center for Genetic Discovery, University of Utah, Salt Lake City, Utah.
authors.forename: Mark
authors.initials: M
authors.lastname: Yandell
mesh_terms: D015894:Genome, Human; D006801:Humans; D012984:Software
keywords: comparative genomics; gene finding; genome annotation; plants