title: Metabolic trade-offs between biomass synthesis and photosynthate export at different light intensities in a genome-scale metabolic model of rice.
abstract: Previously we have used a genome scale model of rice metabolism to describe how metabolism reconfigures at different light intensities in an expanding leaf of rice. Although this established that the metabolism of the leaf was adequately represented, in the model, the scenario was not that of the typical function of the leaf-to provide material for the rest of the plant. Here we extend our analysis to explore the transition to a source leaf as export of photosynthate increases at the expense of making leaf biomass precursors, again as a function of light intensity. In particular we investigate whether, when the leaf is making a smaller range of compounds for export to the phloem, the same changes occur in the interactions between mitochondrial and chloroplast metabolism as seen in biomass synthesis for growth when light intensity increases. Our results show that the same changes occur qualitatively, though there are slight quantitative differences reflecting differences in the energy and redox requirements for the different metabolic outputs.
authors.affiliation: Cell Systems Modelling Group, Department of Biological and Medical Science, Oxford Brookes University Oxford, UK.
authors.forename: Mark G
authors.initials: MG
authors.lastname: Poolman
authors.affiliation: Department of Biophysics, Molecular Biology, and Bioinformatics, Calcutta University Kolkata, India.
authors.forename: Sudip
authors.initials: S
authors.lastname: Kundu
authors.affiliation: Department of Biophysics, Molecular Biology, and Bioinformatics, Calcutta University Kolkata, India.
authors.forename: Rahul
authors.initials: R
authors.lastname: Shaw
authors.affiliation: Cell Systems Modelling Group, Department of Biological and Medical Science, Oxford Brookes University Oxford, UK.
authors.forename: David A
authors.initials: DA
authors.lastname: Fell
keywords: flux balance analysis; metabolic modeling; mitochondrial metabolism; photosynthesis; rice