title: User-guided segmentation of preterm neonate ventricular system from 3-D ultrasound images using convex optimization.
abstract: A three-dimensional (3-D) ultrasound (US) system has been developed to monitor the intracranial ventricular system of preterm neonates with intraventricular hemorrhage (IVH) and the resultant dilation of the ventricles (ventriculomegaly). To measure ventricular volume from 3-D US images, a semi-automatic convex optimization-based approach is proposed for segmentation of the cerebral ventricular system in preterm neonates with IVH from 3-D US images. The proposed semi-automatic segmentation method makes use of the convex optimization technique supervised by user-initialized information. Experiments using 58 patient 3-D US images reveal that our proposed approach yielded a mean Dice similarity coefficient of 78.2% compared with the surfaces that were manually contoured, suggesting good agreement between these two segmentations. Additional metrics, the mean absolute distance of 0.65 mm and the maximum absolute distance of 3.2 mm, indicated small distance errors for a voxel spacing of 0.22 × 0.22 × 0.22 mm(3). The Pearson correlation coefficient (r = 0.97, p < 0.001) indicated a significant correlation of algorithm-generated ventricular system volume (VSV) with the manually generated VSV. The calculated minimal detectable difference in ventricular volume change indicated that the proposed segmentation approach with 3-D US images is capable of detecting a VSV difference of 6.5 cm(3) with 95% confidence, suggesting that this approach might be used for monitoring IVH patients' ventricular changes using 3-D US imaging. The mean segmentation times of the graphics processing unit (GPU)- and central processing unit-implemented algorithms were 50 ± 2 and 205 ± 5 s for one 3-D US image, respectively, in addition to 120 ± 10 s for initialization, less than the approximately 35 min required by manual segmentation. In addition, repeatability experiments indicated that the intra-observer variability ranges from 6.5% to 7.5%, and the inter-observer variability is 8.5% in terms of the coefficient of variation of the Dice similarity coefficient. The intra-class correlation coefficient for ventricular system volume measurements for each independent observer ranged from 0.988 to 0.996 and was 0.945 for three different observers. The coefficient of variation and intra-class correlation coefficient revealed that the intra- and inter-observer variability of the proposed approach introduced by the user initialization was small, indicating good reproducibility, independent of different users.
authors.affiliation: Robarts Research Institute, University of Western Ontario, London, Ontario, Canada. Electronic address: qiu.wu.ch@gmail.com.
authors.forename: Wu
authors.initials: W
authors.lastname: Qiu
authors.affiliation: Robarts Research Institute, University of Western Ontario, London, Ontario, Canada.
authors.forename: Jing
authors.initials: J
authors.lastname: Yuan
authors.affiliation: Robarts Research Institute, University of Western Ontario, London, Ontario, Canada.
authors.forename: Jessica
authors.initials: J
authors.lastname: Kishimoto
authors.affiliation: Robarts Research Institute, University of Western Ontario, London, Ontario, Canada.
authors.forename: Jonathan
authors.initials: J
authors.lastname: McLeod
authors.affiliation: Department of Electronic Engineering, City University of Hong Kong, Hong Kong, China.
authors.forename: Yimin
authors.initials: Y
authors.lastname: Chen
authors.affiliation: Neurosurgery, Department of Clinical Neurologic Sciences, University of Western Ontario, London, Ontario, Canada.
authors.forename: Sandrine
authors.initials: S
authors.lastname: de Ribaupierre
authors.affiliation: Robarts Research Institute, University of Western Ontario, London, Ontario, Canada.
authors.forename: Aaron
authors.initials: A
authors.lastname: Fenster
mesh_terms: D000465:Algorithms; D002543:Cerebral Hemorrhage / Q000000981:diagnostic imaging*; D002552:Cerebral Ventricles / Q000000981:diagnostic imaging*; D006801:Humans; D021621:Imaging, Three-Dimensional / Q000295:instrumentation* / Q000379:methods; D007231:Infant, Newborn; D007234:Infant, Premature; D015588:Observer Variation; D015203:Reproducibility of Results; D014463:Ultrasonography
keywords: 3-D ultrasound imaging; Convex optimization; Intraventricular hemorrhage; Preterm neonate; Ventricular system segmentation