title: Neptunomonas phycophila sp. nov. isolated from a culture of Symbiodinium sp., a dinoflagellate symbiont of the sea anemone Aiptasia tagetes.
abstract: A Gram-stain-negative, facultatively anaerobic, oxidase- and catalase-positive, rod-shaped bacterium, strain SYM1(T), was isolated from a culture of Symbiodinium sp., an algal symbiont of the sea anemone Aiptasia tagetes collected in Puerto Rico. Growth was observed at 4-40 °C (optimum 30 °C), at pH 5.0-11.0 (optimum pH 8.0) and with 0.5-8 % (optimum 2 %) (w/v) NaCl. Phylogenetic analyses of 16S rRNA gene sequences showed that strain SYM1(T) was a member of the genus Neptunomonas with the type strain of Neptunomonas naphthovorans as the closest phylogenetic relative with a pairwise sequence similarity of 98.15 %. However, DNA-DNA relatedness between strain SYM1(T) and N. naphthovorans CIP 106451(T) was 24 %. Moreover, strain SYM1(T) could be distinguished from its closest relative by several phenotypic characteristics such as NaCl, pH and temperature tolerance, nitrate reduction and utilization of carbon substrates. The major cellular fatty acids were C16 : 0, C18 : 1ω7c and summed feature 3 (comprising C16 : 1ω7c and/or iso-C15 : 0 2-OH). The genomic DNA G+C content of strain SYM1(T) was 45 mol%. Ubiquinone-8 (Q-8) was the only respiratory quinone detected. Based on a polyphasic taxonomic characterization, strain SYM1(T) represents a novel species of the genus Neptunomonas, for which the name Neptunomonas phycophila sp. nov. is proposed. The type strain is SYM1(T) ( = LMG 28329(T) = CECT 8716(T)).
authors.affiliation: Departamento de Biologia, CESAM, Universidade de Aveiro, Campus de Santiago, 3810-193 Aveiro, Portugal.
authors.forename: Jörg
authors.initials: J
authors.lastname: Frommlet
authors.affiliation: Departamento de Biologia, CESAM, Universidade de Aveiro, Campus de Santiago, 3810-193 Aveiro, Portugal.
authors.forename: Bárbara
authors.initials: B
authors.lastname: Guimarães
authors.affiliation: Departamento de Biologia, CESAM, Universidade de Aveiro, Campus de Santiago, 3810-193 Aveiro, Portugal.
authors.forename: Lígia
authors.initials: L
authors.lastname: Sousa
authors.affiliation: Departamento de Biologia, CESAM, Universidade de Aveiro, Campus de Santiago, 3810-193 Aveiro, Portugal.
authors.forename: João
authors.initials: J
authors.lastname: Serôdio
authors.affiliation: Departamento de Biologia, CESAM, Universidade de Aveiro, Campus de Santiago, 3810-193 Aveiro, Portugal.
authors.forename: Artur
authors.initials: A
authors.lastname: Alves
mesh_terms: D000818:Animals; D015373:Bacterial Typing Techniques; D001482:Base Composition; D004269:DNA, Bacterial / Q000235:genetics; D004141:Dinoflagellida / Q000382:microbiology*; D005227:Fatty Acids / Q000737:chemistry; D008969:Molecular Sequence Data; D009693:Nucleic Acid Hybridization; D044130:Oceanospirillaceae / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification; D010802:Phylogeny; D011647:Puerto Rico; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012615:Sea Anemones / Q000382:microbiology*; D017422:Sequence Analysis, DNA; D013559:Symbiosis; D014451:Ubiquinone / Q000737:chemistry
chemical_list: D004269:DNA, Bacterial; D005227:Fatty Acids; D012336:RNA, Ribosomal, 16S; D014451:Ubiquinone; C030778:ubiquinone 8