title: Accurate determination of the diffusion coefficient of proteins by Fourier analysis with whole column imaging detection.
abstract: Analysis in the frequency domain is considered a powerful tool to elicit precise information from spectroscopic signals. In this study, the Fourier transformation technique is employed to determine the diffusion coefficient (D) of a number of proteins in the frequency domain. Analytical approaches are investigated for determination of D from both experimental and data treatment viewpoints. The diffusion process is modeled to calculate diffusion coefficients based on the Fourier transformation solution to Fick's law equation, and its results are compared to time domain results. The simulations characterize optimum spatial and temporal conditions and demonstrate the noise tolerance of the method. The proposed model is validated by its application for the electropherograms from the diffusion path of a set of proteins. Real-time dynamic scanning is conducted to monitor dispersion by employing whole column imaging detection technology in combination with capillary isoelectric focusing (CIEF) and the imaging plug flow (iPF) experiment. These experimental techniques provide different peak shapes, which are utilized to demonstrate the Fourier transformation ability in extracting diffusion coefficients out of irregular shape signals. Experimental results confirmed that the Fourier transformation procedure substantially enhanced the accuracy of the determined values compared to those obtained in the time domain.
authors.affiliation: Department of Chemistry, University of Waterloo , Waterloo, Ontario N2l 3G1, Canada.
authors.forename: Atefeh S
authors.initials: AS
authors.lastname: Zarabadi
authors.forename: Janusz
authors.initials: J
authors.lastname: Pawliszyn
mesh_terms: D000818:Animals; D002417:Cattle; D004058:Diffusion; D005583:Fourier Analysis; D006736:Horses; D007525:Isoelectric Focusing / Q000379:methods*; D008956:Models, Chemical; D011506:Proteins / Q000737:chemistry*
chemical_list: D011506:Proteins