title: Next generation sequencing yields the complete mitochondrial genome of the Clarion angelfish, Holacanthus clarionensis (Perciformes: Pomacanthidae).
abstract: In this study, the complete mitogenome sequence of the Clarion angelfish, Holacanthus clarionensis (Perciformes: Pomacanthidae) has been sequenced by next-generation sequencing method. The length of the assembled mitogenome is 16,615 bp, including 13 protein coding genes, 22 transfer RNAs, and two ribosomal RNAs genes. The overall base composition of Clarion angelfish is 28.3% for A, 29.3% for C, 16.5% for G, 25.9% for T and show 85% identities to flame angelfish Centropyge loriculus. The complete mitogenome of the Clarion angelfish provides essential and important DNA molecular data for further phylogeography and evolutionary analysis for marine angelfish phylogeny.
authors.affiliation: a Center of Excellence for the Oceans, National Taiwan Ocean University , Keelung , Taiwan.
authors.forename: Kang-Ning
authors.initials: KN
authors.lastname: Shen
authors.affiliation: b National Museum of Marine Biology and Aquarium , Checheng , Pingtung , Taiwan.|c Graduate Institute of Marine Biodiversity and Evolutionary Biology , Checheng , Pingtung , Taiwan.
authors.forename: Chih-Wei
authors.initials: CW
authors.lastname: Chang
authors.affiliation: d Institute of Ocean and Earth Sciences, University of Malaya , Kuala Lumpur , Malaysia.
authors.forename: Kar-Hoe
authors.initials: KH
authors.lastname: Loh
authors.affiliation: e WeThink Biotech INC. , Taoyuan , Taiwan.|f Zgenebio Biotech INC. , Taipei , Taiwan , and.
authors.forename: Ching-Hung
authors.initials: CH
authors.lastname: Chen
authors.affiliation: g Department of Bioscience Technology , Chung Yuan Christian University , Chung-Li , Taiwan.
authors.forename: Chung-Der
authors.initials: CD
authors.lastname: Hsiao
mesh_terms: D000818:Animals; D001482:Base Composition / Q000235:genetics; D004272:DNA, Mitochondrial / Q000235:genetics; D023061:Gene Order / Q000235:genetics; D020459:Genes, rRNA / Q000235:genetics; D054629:Genome, Mitochondrial / Q000235:genetics*; D059014:High-Throughput Nucleotide Sequencing / Q000379:methods; D010473:Perciformes / Q000235:genetics*; D010802:Phylogeny; D012343:RNA, Transfer / Q000235:genetics; D017422:Sequence Analysis, DNA / Q000379:methods
chemical_list: D004272:DNA, Mitochondrial; D012343:RNA, Transfer
keywords: Clarion angelfish; mitogenome; next generation sequencing