title: Phylogenetic diversity of sulphate-reducing Desulfovibrio associated with three South China Sea sponges.
abstract: Marine sponges harbour dense and diverse micro-organisms which includes sulphate-reducing bacteria (SRB). SRB are known to play a key role in the cycling of marine elements. However, in contrast to carbon and nitrogen cycling bacteria, SRB associated with marine sponges are largely unexplored. In this study, we explored the phylogenetic diversity of the SRB associated with three shallow-water sponges Arenosclera heroni, Dysidea arenaria and Astrosclera willeyana from the South China Sea by cloning-and-sequencing approach of SRB 16S rRNA gene with specific primers. The results showed that SRB associated with sponges mainly belonged to the genus Desulfovibrio in the class Deltaproteobacteria, i.e. a total of 14 Desulfovibrio-related OTUs were obtained from three sponges. The exception is identical OTUs from different sponges. Each sponge species harboured a unique set of Desulfovibrio OTUs, with only a few shared OTUs observed between species, suggesting different species of Desulfovibrio in different species of sponges. Meanwhile, some Desulfovibrio OTUs had a low similarity (<97%) with related sequences in GenBank and phylogenetic analysis indicating novel Desulfovibrio symbionts in sponges. The results contribute to the overall understanding of the phylogenetic diversity of SRB associated with sponges.
  
  
  CONCLUSIONS
  To date, in contrast to carbon and nitrogen cycling bacteria, sulphate-reducing bacteria (SRB) associated with marine sponges are largely unexplored; little is known about the phylogenetic diversity of SRB in different species of sponges. In the present study, phylogenetically diverse sulphate-reducing Desulfovibrio communities, including potential sponge species-specific and novel SRB, were revealed to be associated with South China Sea demosponges by cloning-and-sequencing approach of SRB 16S rRNA gene.
authors: Marine Biotechnology Laboratory, State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.
authors: D
authors: D
authors: Zhang
authors: W
authors: W
authors: Sun
authors: G
authors: G
authors: Feng
authors: F
authors: F
authors: Zhang
authors: R
authors: R
authors: Anbuchezhian
authors: Z
authors: Z
authors: Li
authors: Q
authors: Q
authors: Jiang
mesh_terms: D000818:Animals; D059001:Aquatic Organisms / Q000378:metabolism; D001483:Base Sequence; D044822:Biodiversity; D002681:China; D003901:Desulfovibrio / Q000145:classification* / Q000235:genetics / Q000378:metabolism*; D008969:Molecular Sequence Data; D009792:Oceans and Seas; D010802:Phylogeny; D011161:Porifera / Q000382:microbiology*; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012623:Seawater / Q000382:microbiology; D017422:Sequence Analysis, DNA; D013045:Species Specificity; D013431:Sulfates / Q000378:metabolism*
chemical_list: D012336:RNA, Ribosomal, 16S; D013431:Sulfates
keywords: Desulfovibrio; phylogenetic diversity; sponge; sulphate reduction; sulphate-reducing bacteria