title: The role of the 5' untranslated regions of Potyviridae in translation.
abstract: The Potyviridae family relies on a cap-independent translation mechanism to facilitate protein expression. The genomic architecture of the viral RNAs of the Potyviridae family resembles those of the animal picornaviruses. The viral genomes lack a 5' cap structure. Instead, they have the viral protein VPg covalently linked to the 5' end of the RNA. The viral RNAs code for a single large polyprotein, which is then cleaved into several functional subunits. With their common genome organization with the Picornaviridae, it has been largely assumed that the members of the plant Potyviridae family share similar translation mechanism. We will describe the remarkably diverse translational enhancers identified within the family and their unique mechanisms of translation, from internal recruitment of the ribosomes to ribosomal scanning from the 5' end and the recruitment of the VPg in translation. The divergence among the potyviral translation enhancers is heightened with the recent discovery of Triticum mosaic virus, an atypical member of the Potyviridae family, for which its 5' leader by far exceeds the typical length of plant viral leaders and contains features typically found in animal viruses. Much remains to be learned on how these highly divergent elements enable potyviruses, which include some of the most damaging plant viruses, to take over the host translation apparatus. While no clear consensus sequence, structure or mechanism has been reported yet among the potyviral elements, more thorough studies are needed to fill in the gap of knowledge.
authors: Department of Plant Pathology, University of Wisconsin-Madison, Madison, WI 53706, USA.
authors: Jincan
authors: J
authors: Zhang
authors: Department of Plant Pathology, University of Wisconsin-Madison, Madison, WI 53706, USA.
authors: Robyn
authors: R
authors: Roberts
authors: Department of Plant Pathology, University of Wisconsin-Madison, Madison, WI 53706, USA. Electronic address: rakotondrafa@wisc.edu.
authors: Aurélie M
authors: AM
authors: Rakotondrafara
mesh_terms: D020121:5' Untranslated Regions; D000067556:Internal Ribosome Entry Sites; D010944:Plants / Q000821:virology; D019176:Potyviridae / Q000235:genetics / Q000502:physiology*; D011485:Protein Binding; D014176:Protein Biosynthesis; D012367:RNA, Viral / Q000235:genetics* / Q000378:metabolism; D016601:RNA-Binding Proteins / Q000378:metabolism; D012270:Ribosomes / Q000378:metabolism; D014764:Viral Proteins / Q000378:metabolism
chemical_list: D020121:5' Untranslated Regions; D000067556:Internal Ribosome Entry Sites; D012367:RNA, Viral; D016601:RNA-Binding Proteins; D014764:Viral Proteins
keywords: 5′ UTR; Cap-independent translation; IRES; Potyviridae; Ribosomal scanning; Viral genome-linked protein