title: Multilocus spacer analysis revealed highly homogeneous genetic background of Asian type of Borrelia miyamotoi.
abstract: Borrelia miyamotoi, a member of the relapsing fever group borreliae, was first isolated in Japan and subsequently found in Ixodes ticks in North America, Europe and Russia. Currently, there are three types of B. miyamotoi: Asian or Siberian (transmitted mainly by Ixodes persulcatus), European (Ixodesricinus) and American (Ixodesscapularis and Ixodespacificus). Despite the great genetic distances between B. miyamotoi types, isolates within a type are characterised by an extremely low genetic variability. In particular, strains of B. miyamotoi of Asian type, isolated in Russia from the Baltic sea to the Far East, have been shown to be identical based on the analysis of several conventional genetic markers, such as 16S rRNA, flagellin, outer membrane protein p66 and glpQ genes. Thus, protein or rRNA - coding genes were shown not to be informative enough in studying genetic diversity of B. miyamotoi within a type. In the present paper, we have attempted to design a new multilocus technique based on eight non-coding intergenic spacers (3686bp in total) and have applied it to the analysis of intra-type genetic variability of В. miyamotoi detected in different regions of Russia and from two tick species, I. persulcatus and Ixodespavlovskyi. However, even though potentially the most variable loci were selected, no genetic variability between studied DNA samples was found, except for one nucleotide substitution in two of them. The sequences obtained were identical to those of the reference strain FR64b. Analysis of the data obtained with the GenBank sequences indicates a highly homogeneous genetic background of B. miyamotoi from the Baltic Sea to the Japanese Islands. In this paper, a hypothesis of clonal expansion of B. miyamotoi is discussed, as well as possible mechanisms for the rapid dissemination of one B. miyamotoi clone over large distances.
authors.affiliation: Laboratory of Molecular Genetics, Department of Biology, Ural Federal University, Lenin Avenue 51, Yekaterinburg 620000, Russia.
authors.forename: Tatyana A
authors.initials: TA
authors.lastname: Mukhacheva
authors.affiliation: Laboratory of Molecular Genetics, Department of Biology, Ural Federal University, Lenin Avenue 51, Yekaterinburg 620000, Russia.
authors.forename: Irina I
authors.initials: II
authors.lastname: Salikhova
authors.affiliation: Laboratory of Molecular Genetics, Department of Biology, Ural Federal University, Lenin Avenue 51, Yekaterinburg 620000, Russia. Electronic address: Sergey.Kovalev@urfu.ru.
authors.forename: Sergey Y
authors.initials: SY
authors.lastname: Kovalev
mesh_terms: D001208:Asia; D001483:Base Sequence; D001898:Borrelia / Q000145:classification* / Q000235:genetics*; D021901:DNA, Intergenic; D014644:Genetic Variation; D006801:Humans; D008193:Lyme Disease / Q000382:microbiology*; D058885:Multilocus Sequence Typing; D010802:Phylogeny; D058974:Phylogeography
chemical_list: D021901:DNA, Intergenic
keywords: Borrelia miyamotoi; Clonal expansion; Genetic background; Ixodes; Multilocus spacer analysis