title: Supercharging with m-nitrobenzyl alcohol and propylene carbonate: forming highly charged ions with extended, near-linear conformations.
abstract: The effectiveness of the supercharging reagents m-nitrobenzyl alcohol (m-NBA) and propylene carbonate at producing highly charged protein ions in electrospray ionization is compared. Addition of 5% m-NBA or 15% propylene carbonate increases the average charge of three proteins by ∼21% or ∼23%, respectively, when these ions are formed from denaturing solutions (water/methanol/acetic acid). These results indicate that both reagents are nearly equally effective at supercharging when used at their optimum concentrations. A narrowing of the charge state distribution occurs with both reagents, although this effect is greater for propylene carbonate. Focusing the ion signal into fewer charge states has the advantage of improving sensitivity. The maximum charge state of ubiquitin formed with propylene carbonate is 21+, four charges higher than previously reported. Up to nearly 30% of all residues in a protein can be charged, and the collisional cross sections of the most highly charged ions of both ubiquitin and cytochrome c formed with these supercharging reagents were measured for the first time and found to be similar to those calculated for theoretical highly extended, linear or near-linear conformations. Under native supercharging conditions, m-NBA is significantly more effective at producing high charge states than propylene carbonate.
authors.affiliation: Department of Chemistry, University of California, Berkeley, Berkeley, California 94720-1460, United States.
authors.forename: Catherine C
authors.initials: CC
authors.lastname: Going
authors.affiliation: Department of Chemistry, University of California, Berkeley, Berkeley, California 94720-1460, United States.
authors.forename: Evan R
authors.initials: ER
authors.lastname: Williams
mesh_terms: D001592:Benzyl Alcohols / Q000737:chemistry*; D002256:Carbonic Anhydrases / Q000737:chemistry* / Q000378:metabolism; D045304:Cytochromes c / Q000737:chemistry*; D007477:Ions / Q000737:chemistry / Q000378:metabolism; D011407:Propane / Q000031:analogs & derivatives* / Q000737:chemistry; D011487:Protein Conformation; D012995:Solubility; D053719:Tandem Mass Spectrometry; D025801:Ubiquitin / Q000737:chemistry*
chemical_list: D001592:Benzyl Alcohols; D007477:Ions; D025801:Ubiquitin; C045990:propylene carbonate; D045304:Cytochromes c; D002256:Carbonic Anhydrases; C046886:3-nitrobenzyl alcohol; D011407:Propane