Investigating different duplication pattern of essential genes in mouse and human.
Gene duplication is one of the major driving forces shaping genome and organism evolution and thought to be itself regulated by some intrinsic properties of the gene. Comparing the essential genes among mouse and human, we observed that the essential genes avoid duplication in mouse while prefer to remain duplicated in humans. In this study, we wanted to explore the reasons behind such differences in gene essentiality by cross-species comparison of human and mouse. Moreover, we examined essential genes that are duplicated in humans are functionally more redundant than that in mouse. The proportion of paralog pseudogenization of essential genes is higher in mouse than that of humans. These duplicates of essential genes are under stringent dosage regulation in human than in mouse. We also observed slower evolutionary rate in the paralogs of human essential genes than the mouse counterpart. Together, these results clearly indicate that human essential genes are retained as duplicates to serve as backed up copies that may shield themselves from harmful mutations.
Bioinformatics Centre, Bose Institute, Kolkata, West Bengal, India.
Debarun
D
Acharya
Bioinformatics Centre, Bose Institute, Kolkata, West Bengal, India.
Dola
D
Mukherjee
Bioinformatics Centre, Bose Institute, Kolkata, West Bengal, India.
Soumita
S
Podder
Bioinformatics Centre, Bose Institute, Kolkata, West Bengal, India.
Tapash C
TC
Ghosh
D000818:Animals; D019143:Evolution, Molecular; D020440:Gene Duplication; D050437:Genes, Developmental; D020043:Genes, Essential; D006801:Humans; D051379:Mice; D008957:Models, Genetic; D011544:Pseudogenes