title: Quantification and characterization of microbial biofilm community attached on the surface of fermentation vessels used in green table olive processing.
abstract: The aim of the present study was the quantification of biofilm formed on the surface of plastic vessels used in Spanish-style green olive fermentation and the characterization of the biofilm community by means of molecular fingerprinting. Fermentation vessels previously used in green olive processing were subjected to sampling at three different locations, two on the side and one on the bottom of the vessel. Prior to sampling, two cleaning treatments were applied to the containers, including (a) washing with hot tap water (60 °C) and household detergent (treatment A) and (b) washing with hot tap water, household detergent and bleach (treatment B). Population (expressed as log CFU/cm(2)) of total viable counts (TVC), lactic acid bacteria (LAB) and yeasts were enumerated by standard plating. Bulk cells (whole colonies) from agar plates were isolated for further characterization by PCR-DGGE. Results showed that regardless of the cleaning treatment no significant differences were observed between the different sampling locations in the vessel. The initial microbial population before cleaning ranged between 3.0-4.5 log CFU/cm(2) for LAB and 4.0-4.6 log CFU/cm(2) for yeasts. Cleaning treatments exhibited the highest effect on LAB that were recovered at 1.5 log CFU/cm(2) after treatment A and 0.2 log CFU/cm(2) after treatment B, whereas yeasts were recovered at approximately 1.9 log CFU/cm(2) even after treatment B. High diversity of yeasts was observed between the different treatments and sampling spots. The most abundant species recovered belonged to Candida genus, while Wickerhamomyces anomalus, Debaryomyces hansenii and Pichia guilliermondii were frequently detected. Among LAB, Lactobacillus pentosus was the most abundant species present on the abiotic surface of the vessels.
authors.affiliation: Agricultural University of Athens, Department of Food Science and Human Nutrition, Laboratory of Microbiology and Biotechnology of Foods, 75 Iera Odos str., Athens GR-11855, Greece.
authors.forename: Athena
authors.initials: A
authors.lastname: Grounta
authors.affiliation: Agricultural University of Athens, Department of Food Science and Human Nutrition, Laboratory of Microbiology and Biotechnology of Foods, 75 Iera Odos str., Athens GR-11855, Greece.
authors.forename: Agapi I
authors.initials: AI
authors.lastname: Doulgeraki
authors.affiliation: Agricultural University of Athens, Department of Food Science and Human Nutrition, Laboratory of Microbiology and Biotechnology of Foods, 75 Iera Odos str., Athens GR-11855, Greece. Electronic address: stathispanagou@aua.gr.
authors.forename: Efstathios Z
authors.initials: EZ
authors.lastname: Panagou
mesh_terms: D018441:Biofilms; D019149:Bioreactors / Q000382:microbiology*; D021903:DNA, Ribosomal Spacer / Q000235:genetics; D005285:Fermentation; D005511:Food Handling; D005516:Food Microbiology; D007777:Lactobacillaceae / Q000145:classification / Q000235:genetics / Q000302:isolation & purification; D064307:Microbiota / Q000235:genetics / Q000502:physiology*; D008969:Molecular Sequence Data; D031658:Olea / Q000382:microbiology*; D010969:Plastics; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D013030:Spain; D015003:Yeasts / Q000145:classification / Q000235:genetics / Q000302:isolation & purification
chemical_list: D021903:DNA, Ribosomal Spacer; D010969:Plastics; D012336:RNA, Ribosomal, 16S
keywords: Fermentation vessels; Lactic acid bacteria; Microbial biofilm; Table olives; Yeasts