title: NMR chemical shift prediction of glycans: application of the computer program CASPER in structural analysis.
abstract: Carbohydrate molecules have highly complex structures and the constituent monosaccharides and substituents are linked to each other in a large number of ways. NMR spectroscopy can be used to unravel these structures, but the process may be tedious and time-consuming. The computerized approach based on the CASPER program can facilitate rapid structural determination of glycans with little user intervention, which results in the most probable primary structure of the investigated carbohydrate material. Additionally, (1)H and (13)C NMR chemical shifts of a user-defined structure can be predicted, and this tool may thus be employed in many aspects where NMR spectroscopy plays an important part of a study.
authors.affiliation: Department of Biochemistry and Biophysics, Science for Life Laboratory, Stockholm University, Solna, 171 21, Sweden.
authors.forename: Magnus
authors.initials: M
authors.lastname: Lundborg
authors.forename: Göran
authors.initials: G
authors.lastname: Widmalm
mesh_terms: D066241:Carbon-13 Magnetic Resonance Spectroscopy; D004926:Escherichia coli / Q000378:metabolism; D009682:Magnetic Resonance Spectroscopy / Q000379:methods*; D008958:Models, Molecular; D011134:Polysaccharides / Q000737:chemistry*; D066244:Proton Magnetic Resonance Spectroscopy; D012984:Software
chemical_list: D011134:Polysaccharides