title: Diagnosis of Neisseria gonorrhoeae using molecular beacon.
abstract: Neisseria gonorrhoeae is an important sexually transmitted diseases (STD) causing pathogen worldwide. Due to absence of an affordable diagnostic assay, routine screening of gonococcal infection becomes impossible in developing countries where infection rates are maximum. Treatment is given on the basis of symptoms alone which leads to spread of infection. Thus, development of a rapid, sensitive, specific, and PCR based visual diagnostic assay suitable for developing countries, required for better disease management, is aimed at in present study. Endocervical swabs were collected from patients visiting gynecology department of various hospitals in Delhi. In-house PCR based assay was developed and modified to visual assay using molecular beacon for end-point detection. It was evaluated against Roche AMPLICOR NG kit and rmp gene. Specificity of beacon was confirmed by competition experiments. Diagnostic test was 98.21% specific and 99.59% sensitive whereas negative and positive predicted value were 99.40% and 98.78%, respectively. We also observed that twice the concentration (2X) of premix was stable at 4°C for 4 months and dry swab samples gave concordant results with that of wet swabs. These features make the test best suitable for routine diagnosis of genital infections in developing countries.
authors: Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi 110007, India.
authors: Divya
authors: 0000-0002-9197-9423
authors: D
authors: Sachdev
authors: Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi 110007, India.
authors: Achchhe Lal
authors: AL
authors: Patel
authors: Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi 110007, India.
authors: Subash Chandra
authors: SC
authors: Sonkar
authors: Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi 110007, India.
authors: Indu
authors: I
authors: Kumari
authors: Dr. B.R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi 110007, India.
authors: Daman
authors: D
authors: Saluja
mesh_terms: D000293:Adolescent; D000328:Adult; D017931:DNA Primers / Q000378:metabolism; D004587:Electrophoresis, Agar Gel; D005260:Female; D006069:Gonorrhea / Q000175:diagnosis* / Q000382:microbiology*; D006801:Humans; D007202:Indicators and Reagents; D008875:Middle Aged; D015335:Molecular Probes / Q000378:metabolism*; D009344:Neisseria gonorrhoeae / Q000502:physiology*; D016133:Polymerase Chain Reaction; D011237:Predictive Value of Tests; D012680:Sensitivity and Specificity; D013696:Temperature; D055815:Young Adult
chemical_list: D017931:DNA Primers; D007202:Indicators and Reagents; D015335:Molecular Probes