title: Selection and molecular characterization of cellulolytic-xylanolytic fungi from surface soil-biomass mixtures from Black Belt sites.
abstract: Plant biomass is an abundant renewable natural resource that can be transformed into chemical feedstocks. Enzymes used in saccharification of lignocellulosic biomass are a major part of biofuel production costs. A cocktail of cellulolytic and xylanolytic enzymes are required for optimal saccharification of biomass. Accordingly, thirty-two fungal pure cultures were obtained from surface soil-biomass mixtures collected from Black Belt sites in Alabama by culturing on lignocellulosic biomass medium. The fungal strains were screened for the coproduction of cellulolytic and xylanolytic enzymes. Strains that displayed promising levels of cellulolytic and xylanolytic enzymes were characterized by molecular analysis of DNA sequences from the large subunit and internal transcribed spacer (ITS) of their ribosomal RNA gene. Nucleotide sequence analysis revealed that two most promising isolates FS22A and FS5A were most similar to Penicillium janthinellum and Trichoderma virens. Production dynamics of cellulolytic and xylanolytic enzymes from these two strains were explored in submerged fermentation. Volumetric productivity after 120 h incubation was 121.08 units/L/h and 348 units/L/h for the filter paper cellulase and xylanase of strain FS22A, and 90.83 units/L/h and 359 units/L/h, respectively for strain FS5A. Assays with 10 times dilution of enzymes revealed that the activities were much higher than that observed in the crude culture supernatant. Additionally, both FS22A and FS5A also produced amylase in lignocellulose medium. The enzyme profiles of these strains and their activities suggest potential applications in cost effective biomass conversion and biodegradation.
authors: Department of Biology, Bioprocessing and Biofuel Research Lab, Auburn University at Montgomery, AL 36124, USA. Electronic address: bokeke@aum.edu.
authors: Benedict C
authors: BC
authors: Okeke
authors: Department of Biology, Bioprocessing and Biofuel Research Lab, Auburn University at Montgomery, AL 36124, USA.
authors: Rosine W
authors: RW
authors: Hall
authors: Department of Biology, Bioprocessing and Biofuel Research Lab, Auburn University at Montgomery, AL 36124, USA.
authors: Ananda
authors: A
authors: Nanjundaswamy
authors: Department of Biology, Bioprocessing and Biofuel Research Lab, Auburn University at Montgomery, AL 36124, USA.
authors: M Sue
authors: MS
authors: Thomson
authors: Department of Biology, Bioprocessing and Biofuel Research Lab, Auburn University at Montgomery, AL 36124, USA.
authors: Yasaman
authors: Y
authors: Deravi
authors: Department of Biology, Bioprocessing and Biofuel Research Lab, Auburn University at Montgomery, AL 36124, USA.
authors: Leah
authors: L
authors: Sawyer
authors: Department of Biology, Bioprocessing and Biofuel Research Lab, Auburn University at Montgomery, AL 36124, USA.
authors: Andrew
authors: A
authors: Prescott
mesh_terms: D000407:Alabama; D000681:Amylases / Q000032:analysis; D044602:Cellulases / Q000032:analysis; D002482:Cellulose / Q000378:metabolism*; D016000:Cluster Analysis; D004271:DNA, Fungal / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D020459:Genes, rRNA; D006868:Hydrolysis; D010407:Penicillium / Q000145:classification / Q000201:enzymology / Q000302:isolation & purification* / Q000378:metabolism*; D010802:Phylogeny; D012331:RNA, Fungal / Q000235:genetics; D012335:RNA, Ribosomal / Q000235:genetics; D017422:Sequence Analysis, DNA; D012988:Soil Microbiology; D014242:Trichoderma / Q000145:classification / Q000201:enzymology / Q000302:isolation & purification* / Q000378:metabolism*; D014990:Xylans / Q000378:metabolism*
chemical_list: D004271:DNA, Fungal; D004275:DNA, Ribosomal; D012331:RNA, Fungal; D012335:RNA, Ribosomal; C065096:RNA, ribosomal, 26S; D014990:Xylans; D002482:Cellulose; D000681:Amylases; D044602:Cellulases
keywords: Cellulolytic enzymes; Fungal ribosomal RNA gene; Lignocellulose biomass; Xylanolytic enzymes