title: GST M1-T1 null allele frequency patterns in geographically assorted human populations: a phylogenetic approach.
abstract: Genetic diversity in drug metabolism and disposition is mainly considered as the outcome of the inter-individual genetic variation in polymorphism of drug-xenobiotic metabolizing enzyme (XME). Among the XMEs, glutathione-S-transferases (GST) gene loci are an important candidate for the investigation of diversity in allele frequency, as the deletion mutations in GST M1 and T1 genotypes are associated with various cancers and genetic disorders of all major Population Affiliations (PAs). Therefore, the present population based phylogenetic study was focused to uncover the frequency distribution pattern in GST M1 and T1 null genotypes among 45 Geographically Assorted Human Populations (GAHPs). The frequency distribution pattern for GST M1 and T1 null alleles have been detected in this study using the data derived from literatures representing 44 populations affiliated to Africa, Asia, Europe, South America and the genome of PA from Gujarat, a region in western India. Allele frequency counting for Gujarat PA and scattered plot analysis for geographical distribution among the PAs were performed in SPSS-21. The GST M1 and GST T1 null allele frequencies patterns of the PAs were computed in Seqboot, Gendist program of Phylip software package (3.69 versions) and Unweighted Pair Group method with Arithmetic Mean in Mega-6 software. Allele frequencies from South African Xhosa tribe, East African Zimbabwe, East African Ethiopia, North African Egypt, Caucasian, South Asian Afghanistan and South Indian Andhra Pradesh have been identified as the probable seven patterns among the 45 GAHPs investigated in this study for GST M1-T1 null genotypes. The patternized null allele frequencies demonstrated in this study for the first time addresses the missing link in GST M1-T1 null allele frequencies among GAHPs.
authors: Department of Biotechnology, Shree M. & N. Virani Science College, Rajkot, Gujarat, 360 005, India; Department of Plant Biotechnology, School of Biotechnology, Madurai Kamaraj University, Madurai, Tamilnadu, 625 021, India.
authors: Senthilkumar Pitchalu
authors: SP
authors: Kasthurinaidu
authors: Department of Animal Science, School of Life Sciences, Bharathidasan University, Tiruchirappalli, Tamilnadu, 620 024, India.
authors: Thirumurugan
authors: T
authors: Ramasamy
authors: Department of Plant Biotechnology, School of Biotechnology, Madurai Kamaraj University, Madurai, Tamilnadu, 625 021, India.
authors: Jayachitra
authors: J
authors: Ayyavoo
authors: Department of Biotechnology, Shree M. & N. Virani Science College, Rajkot, Gujarat, 360 005, India.
authors: Dhvani Kirtikumar
authors: DK
authors: Dave
authors: Department of Biotechnology, Shree M. & N. Virani Science College, Rajkot, Gujarat, 360 005, India.
authors: Divya Anantray
authors: DA
authors: Adroja
mesh_terms: D005787:Gene Frequency; D005843:Geography; D005982:Glutathione Transferase / Q000235:genetics*; D006801:Humans; D010802:Phylogeny
chemical_list: D005982:Glutathione Transferase; C413545:glutathione S-transferase T1