title: Halorubrum gandharaense sp. nov., an alkaliphilic haloarchaeon from commercial rock salt.
abstract: A Gram-stain-negative, non-motile, pleomorphic rod-shaped, orange-red-pigmented, facultatively aerobic and haloalkaliphilic archaeon, strain MK13-1T, was isolated from commercial rock salt imported from Pakistan. The NaCl, pH and temperature ranges for growth of strain MK13-1T were 3.0-5.2 M NaCl, pH 8.0-11.0 and 15-50 °C, respectively. Optimal growth occurred at 3.2-3.4 M NaCl, pH 9.0-9.5 and 45 °C. Addition of Mg2+ was not required for growth. The major polar lipids of the isolate were C20C20 and C20C25 archaeol derivatives of phosphatidylglycerol and phosphatidylglycerol phosphate methyl ester. Glycolipids were not detected. The DNA G+C content was 64.1 mol%. The 16S rRNA gene sequence of strain MK13-1T was most closely related to those of the species of the genus Halorubrum, Halorubrum luteum CECT 7303T (95.9% similarity), Halorubrum alkaliphilum JCM 12358T (95.3%), Halorubrum kocurii JCM 14978T (95.3%) and Halorubrum lipolyticum JCM 13559T (95.3%). The rpoB' gene sequence of strain MK13-1T had < 90% sequence similarity to those of other members of the genus Halorubrum. Based on the phylogenetic analysis and phenotypic characterization, strain MK13-1T may represent a novel species of the genus Halorubrum, for which the name Halorubrum gandharaense sp. nov. is proposed, with the type strain MK13-1T ( = JCM 17823T = CECT 7963T).
authors: Department of Biological Applied Chemistry, Graduate School of Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.
authors: Yusuke
authors: Y
authors: Kondo
authors: Department of Biological Applied Chemistry, Graduate School of Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.|Japan Agency for Marine-Earth Science and Technology, 2-15, Natsushima-cho, Yokosuka-shi, Kanagawa 237-0061, Japan.
authors: Hiroaki
authors: H
authors: Minegishi
authors: Department of Biological Applied Chemistry, Graduate School of Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.
authors: Akinobu
authors: A
authors: Echigo
authors: Japan Agency for Marine-Earth Science and Technology, 2-15, Natsushima-cho, Yokosuka-shi, Kanagawa 237-0061, Japan.
authors: Yasuhiro
authors: Y
authors: Shimane
authors: Halophiles Research Institute, 677-1 Shimizu, Noda-shi, Chiba 278-0043, Japan.
authors: Masahiro
authors: M
authors: Kamekura
authors: RIKEN BioResource Center, 3-1-1 Koyadai, Tukuba-shi, Ibaraki 305-0074, Japan.
authors: Takashi
authors: T
authors: Itoh
authors: RIKEN BioResource Center, 3-1-1 Koyadai, Tukuba-shi, Ibaraki 305-0074, Japan.
authors: Moriya
authors: M
authors: Ohkuma
authors: Department of Biological Applied Chemistry, Graduate School of Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.
authors: Naoko
authors: N
authors: Takahashi-Ando
authors: Department of Biological Applied Chemistry, Graduate School of Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.
authors: Yasumasa
authors: Y
authors: Fukushima
authors: Department of Biological Applied Chemistry, Graduate School of Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.
authors: Yasuhiko
authors: Y
authors: Yoshida
authors: Department of Biological Applied Chemistry, Graduate School of Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.
authors: Ron
authors: R
authors: Usami
mesh_terms: D001482:Base Composition; D019641:DNA, Archaeal / Q000235:genetics; D055352:Halorubrum / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification; D008969:Molecular Sequence Data; D010154:Pakistan; D010743:Phospholipids / Q000737:chemistry; D010802:Phylogeny; D010858:Pigmentation; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA; D012965:Sodium Chloride; D013696:Temperature
chemical_list: D019641:DNA, Archaeal; D010743:Phospholipids; D012336:RNA, Ribosomal, 16S; D012965:Sodium Chloride