title: The ReproGenomics Viewer: an integrative cross-species toolbox for the reproductive science community.
abstract: We report the development of the ReproGenomics Viewer (RGV), a multi- and cross-species working environment for the visualization, mining and comparison of published omics data sets for the reproductive science community. The system currently embeds 15 published data sets related to gametogenesis from nine model organisms. Data sets have been curated and conveniently organized into broad categories including biological topics, technologies, species and publications. RGV's modular design for both organisms and genomic tools enables users to upload and compare their data with that from the data sets embedded in the system in a cross-species manner. The RGV is freely available at http://rgv.genouest.org.
authors.affiliation: Inserm U1085-Irset, Université de Rennes 1, F-35042 Rennes, France Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA/INRIA) - GenOuest platform, Université de Rennes 1, F-35042 Rennes, France.
authors.forename: Thomas A
authors.initials: TA
authors.lastname: Darde
authors.affiliation: Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA/INRIA) - GenOuest platform, Université de Rennes 1, F-35042 Rennes, France.
authors.forename: Olivier
authors.initials: O
authors.lastname: Sallou
authors.affiliation: Inserm U1085-Irset, Université de Rennes 1, F-35042 Rennes, France.
authors.forename: Emmanuelle
authors.initials: E
authors.lastname: Becker
authors.affiliation: Inserm U1085-Irset, Université de Rennes 1, F-35042 Rennes, France.
authors.forename: Bertrand
authors.initials: B
authors.lastname: Evrard
authors.affiliation: Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA/INRIA) - GenOuest platform, Université de Rennes 1, F-35042 Rennes, France.
authors.forename: Cyril
authors.initials: C
authors.lastname: Monjeaud
authors.affiliation: Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA/INRIA) - GenOuest platform, Université de Rennes 1, F-35042 Rennes, France.
authors.forename: Yvan
authors.initials: Y
authors.lastname: Le Bras
authors.affiliation: Inserm U1085-Irset, Université de Rennes 1, F-35042 Rennes, France Ecole des Hautes Études en Santé Publique, Avenue du Professeur Léon-Bernard, F-35043 Rennes, France.
authors.forename: Bernard
authors.initials: B
authors.lastname: Jégou
authors.affiliation: Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA/INRIA) - GenOuest platform, Université de Rennes 1, F-35042 Rennes, France.
authors.forename: Olivier
authors.initials: O
authors.lastname: Collin
authors.affiliation: Inserm U1085-Irset, Université de Rennes 1, F-35042 Rennes, France.
authors.forename: Antoine D
authors.initials: AD
authors.lastname: Rolland
authors.affiliation: Inserm U1085-Irset, Université de Rennes 1, F-35042 Rennes, France frederic.chalmel@inserm.fr.
authors.forename: Frédéric
authors.initials: F
authors.lastname: Chalmel
mesh_terms: D000818:Animals; D057225:Data Mining; D005260:Female; D005718:Gametogenesis / Q000235:genetics*; D023281:Genomics; D006801:Humans; D020407:Internet; D008297:Male; D051379:Mice; D051381:Rats; D012984:Software; D013091:Spermatogenesis / Q000235:genetics