MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation.
MyPro is a software pipeline for high-quality prokaryotic genome assembly and annotation. It was validated on 18 oral streptococcal strains to produce submission-ready, annotated draft genomes. MyPro installed as a virtual machine and supported by updated databases will enable biologists to perform quality prokaryotic genome assembly and annotation with ease.
Division of Biostatistics and Bioinformatics, Institute of Population Health Sciences, National Health Research Institutes, Miaoli County, Taiwan.
Yu-Chieh
YC
Liao
Division of Biostatistics and Bioinformatics, Institute of Population Health Sciences, National Health Research Institutes, Miaoli County, Taiwan.
Hsin-Hung
HH
Lin
Department of Oral Biology, University at Buffalo, State University of New York, Buffalo, NY, USA.
Amarpreet
A
Sabharwal
Department of Oral Biology, University at Buffalo, State University of New York, Buffalo, NY, USA.
Elaine M
EM
Haase
Department of Oral Biology, University at Buffalo, State University of New York, Buffalo, NY, USA.
Frank A
FA
Scannapieco
D019295:Computational Biology; D030541:Databases, Genetic; D016680:Genome, Bacterial; D058977:Molecular Sequence Annotation / Q000379:methods*; D012984:Software; D013291:Streptococcus / Q000235:genetics
Annotation; Assembly; Bioinformatics; Prokaryote; Whole genome sequencing