title: Recent advances in hopanoids analysis: Quantification protocols overview, main research targets and selected problems of complex data exploration.
abstract: Pentacyclic triterpenoids, particularly hopanoids, are organism-specific compounds and are generally considered as useful biomarkers that allow fingerprinting and classification of biological, environmental and geological samples. Simultaneous quantification of various hopanoids together with battery of related non-polar and low-molecular mass compounds may provide principal information for geochemical and environmental research focusing on both modern and ancient investigations. Target compounds can be derived from microbial biomass, water columns, sediments, coals, crude fossils or rocks. This create number of analytical problems due to different composition of the analytical matrix and interfering compounds and therefore, proper optimization of quantification protocols for such biomarkers is still the challenge. In this work we summarizing typical analytical protocols that were recently applied for quantification of hopanoids like compounds from different samples. Main steps including components of interest extraction, pre-purification, fractionation, derivatization and quantification involving gas (1D and 2D) as well as liquid separation techniques (liquid-liquid extraction, solid-phase extraction, planar and low resolution column chromatography, high-performance liquid chromatography) are described and discussed from practical point of view, mainly based on the experimental papers that were published within last two years, where significant increase in hopanoids research was noticed. The second aim of this review is to describe the latest research trends concerning determination of hopanoids and related low-molecular mass lipids analyzed in various samples including sediments, rocks, coals, crude oils and plant fossils as well as stromatolites and microbial biomass cultivated under different conditions. It has been found that majority of the most recent papers are based on uni- or bivariate approach for complex data analysis. Data interpretation involves number of physicochemical parameters and hopanoids quantities or given biomarkers mass ratios derived from high-throughput separation and detection systems, typically GC-MS and HPLC-MS. Based on quantitative data reported in recently published experimental works it has been demonstrated that multivariate data analysis using e.g. principal components computations may significantly extend our knowledge concerning proper biomarkers selection and samples classification by means of hopanoids and related non-polar compounds.
authors.affiliation: Section of Toxicology and Bioanalytics, Department of Civil and Environmental Engineering, Koszalin University of Technology, Śniadeckich 2, 75-453 Koszalin, Poland. Electronic address: pkzarz@wp.pl.
authors.forename: Paweł K
authors.initials: PK
authors.lastname: Zarzycki
authors.affiliation: Apteka "Na Słowińców", Słowińców 8/1, 78-100 Kołobrzeg, Poland.
authors.forename: Joanna K
authors.initials: JK
authors.lastname: Portka
mesh_terms: D001419:Bacteria / Q000737:chemistry*; D002851:Chromatography, High Pressure Liquid / Q000379:methods; D057225:Data Mining / Q000379:methods; D004784:Environmental Monitoring / Q000379:methods*; D008401:Gas Chromatography-Mass Spectrometry / Q000379:methods; D019015:Geologic Sediments / Q000032:analysis; D013058:Mass Spectrometry / Q000379:methods*; D052616:Solid Phase Extraction / Q000379:methods; D014315:Triterpenes / Q000032:analysis* / Q000302:isolation & purification
chemical_list: D014315:Triterpenes; C025206:hopane
keywords: Data mining; Environmental and geological samples; Fingerprinting; Hopanoids quantification; Multivariate analysis; Pentacyclic triterpenoids; Principal component analysis