title: CerebralWeb: a Cytoscape.js plug-in to visualize networks stratified by subcellular localization.
abstract: CerebralWeb is a light-weight JavaScript plug-in that extends Cytoscape.js to enable fast and interactive visualization of molecular interaction networks stratified based on subcellular localization or other user-supplied annotation. The application is designed to be easily integrated into any website and is configurable to support customized network visualization. CerebralWeb also supports the automatic retrieval of Cerebral-compatible localizations for human, mouse and bovine genes via a web service and enables the automated parsing of Cytoscape compatible XGMML network files. CerebralWeb currently supports embedded network visualization on the InnateDB (www.innatedb.com) and Allergy and Asthma Portal (allergen.innatedb.com) database and analysis resources. Database tool URL: http://www.innatedb.com/CerebralWeb
authors.affiliation: Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada, EMBL Australia Group, South Australian Health and Medical Research Institute, Adelaide, SA 5000, Australia and School of Medicine, Flinders University, Bedford Park, SA 5042, Australia.
authors.forename: Silvia
authors.initials: S
authors.lastname: Frias
authors.affiliation: Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada, EMBL Australia Group, South Australian Health and Medical Research Institute, Adelaide, SA 5000, Australia and School of Medicine, Flinders University, Bedford Park, SA 5042, Australia.
authors.forename: Kenneth
authors.initials: K
authors.lastname: Bryan
authors.affiliation: Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada, EMBL Australia Group, South Australian Health and Medical Research Institute, Adelaide, SA 5000, Australia and School of Medicine, Flinders University, Bedford Park, SA 5042, Australia.
authors.forename: Fiona S L
authors.initials: FS
authors.lastname: Brinkman
authors.affiliation: Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada, EMBL Australia Group, South Australian Health and Medical Research Institute, Adelaide, SA 5000, Australia and School of Medicine, Flinders University, Bedford Park, SA 5042, Australia Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada, EMBL Australia Group, South Australian Health and Medical Research Institute, Adelaide, SA 5000, Australia and School of Medicine, Flinders University, Bedford Park, SA 5042, Australia david.lynn@sahmri.com.
authors.forename: David J
authors.initials: DJ
authors.lastname: Lynn
mesh_terms: D000818:Animals; D002417:Cattle; D066289:Data Curation / Q000379:methods*; D057225:Data Mining / Q000379:methods*; D030541:Databases, Genetic; D006801:Humans; D051379:Mice; D012984:Software