title: Comparison of two commercial kits and an in-house ELISA for the detection of equine rotavirus in foal feces.
abstract: Group A rotaviruses (RVA) are important infectious agents associated with diarrhea in the young of several animal species including foals. Currently, a variety of diagnosis methods are commercially available, like ELISA, latex agglutination and immunochromatographic assays. These commercial tests are mainly designed for the detection of human RVA; its applicability in veterinary diagnosis has been poorly studied. The aim of this study was to compare the sensitivity and specificity of two commercial diagnostic kits, Pathfinder™ Rotavirus and FASTest Rota® strip, with an in-house KERI ELISA, for the detection of equine RVA. A total of 172 stool samples from Thoroughbred foals with diarrhea were analyzed. The presence of equine RVA in samples in which only one of the three methods showed positive results was confirmed by RT-PCR. A sample was considered "true positive" when RVA was detected by at least two of the methods, and "true negative" when it tested negative by the three assays. Following these criteria, 50 samples were found positive and 122 were found negative, and were handled as reference population for the assay validation. Pathfinder™ Rotavirus assay showed 32% sensitivity and 97% specificity, FASTest Rota® strip, 92% sensitivity and 97% specificity, and KERI ELISA, 76% sensitivity and 93% specificity. Pathfinder™ Rotavirus showed 77%, FASTest Rota® strip 95%, and KERI ELISA 88% accuracy to correctly classify the samples as equine RVA positive or negative. Pathfinder failed specifically to detect equine RVA G3P12I6 genotype; such performance might be related to the specificity of the monoclonal antibody included in this kit. According to our results, differences among VP6 genotypes could influence the sensitivity to detect equine RVA in foal feces, and thus assay validation of diagnostic kits for each species is necessary. In conclusion, FASTest Rota® strip is more suitable than ELISA Pathfinder™ Rotavirus for the screening of rotavirus infection in foals. The KERI ELISA showed an acceptable performance, and could be considered a proper economic alternative for equine RVA diagnosis.
authors.affiliation: Institutode Virología, CICVyA, INTA-Castelar, Nicolás Repetto y De los Reseros s/n (1686), Hurlingham Buenos Aires, Argentina.
authors.forename: S
authors.initials: S
authors.lastname: Miño
authors.affiliation: MEGACOR Diagnostk GmbH Lochauer Str. 2 A 6912 Hörbranz, Austria.
authors.forename: A
authors.initials: A
authors.lastname: Kern
authors.affiliation: Institutode Virología, CICVyA, INTA-Castelar, Nicolás Repetto y De los Reseros s/n (1686), Hurlingham Buenos Aires, Argentina; Escuela de Veterinaria, Universidad del Salvador, Champagnat 1599, Ruta Panamericana km54.5 (B1630AHU), Pilar, Buenos Aires, Argentina.
authors.forename: M
authors.initials: M
authors.lastname: Barrandeguy
authors.affiliation: Institutode Virología, CICVyA, INTA-Castelar, Nicolás Repetto y De los Reseros s/n (1686), Hurlingham Buenos Aires, Argentina. Electronic address: vparreno@cnia.inta.gov.ar.
authors.forename: V
authors.initials: V
authors.lastname: Parreño
mesh_terms: D000818:Animals; D003955:Diagnostic Tests, Routine / Q000379:methods*; D005243:Feces / Q000821:virology*; D006736:Horses; D007118:Immunoassay / Q000379:methods*; D008969:Molecular Sequence Data; D012367:RNA, Viral / Q000235:genetics; D012401:Rotavirus / Q000302:isolation & purification*; D012400:Rotavirus Infections / Q000662:veterinary* / Q000821:virology; D012680:Sensitivity and Specificity; D017422:Sequence Analysis, DNA; D014730:Veterinary Medicine / Q000379:methods*
chemical_list: D012367:RNA, Viral
keywords: ELISA validation; Foals diarrhea; Kappa value; ROC curve; VP6