title: Goldindec: A Novel Algorithm for Raman Spectrum  Baseline Correction.
abstract: Raman spectra have been widely used in biology, physics, and chemistry and have become an essential tool for the studies of macromolecules. Nevertheless, the raw Raman signal is often obscured by a broad background curve (or baseline) due to the intrinsic fluorescence of the organic molecules, which leads to unpredictable negative effects in quantitative analysis of Raman spectra. Therefore, it is essential to correct this baseline before analyzing raw Raman spectra. Polynomial fitting has proven to be the most convenient and simplest method and has high accuracy. In polynomial fitting, the cost function used and its parameters are crucial. This article proposes a novel iterative algorithm named Goldindec, freely available for noncommercial use as noted in text, with a new cost function that not only conquers the influence of great peaks but also solves the problem of low correction accuracy when there is a high peak number. Goldindec automatically generates parameters from the raw data rather than by empirical choice, as in previous methods. Comparisons with other algorithms on the benchmark data show that Goldindec has a higher accuracy and computational efficiency, and is hardly affected by great peaks, peak number, and wavenumber.
authors.forename: Juntao
authors.initials: J
authors.lastname: Liu
authors.forename: Jianyang
authors.initials: J
authors.lastname: Sun
authors.forename: Xiuzhen
authors.initials: X
authors.lastname: Huang
authors.forename: Guojun
authors.initials: G
authors.lastname: Li
authors.forename: Binqiang
authors.initials: B
authors.lastname: Liu
mesh_terms: D000465:Algorithms; D005453:Fluorescence; D015233:Models, Statistical; D013059:Spectrum Analysis, Raman / Q000379:methods*